RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 SMAP1Q8IYB5 467 aaPredicted RBP18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 LARP4BQ92615 738 aaKnown RBP18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 ERCC4Q92889 916 aaPredicted RBP18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 DYDC2Q96IM9 177 aa18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 APBA2Q99767 749 aa18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 TINF2Q9BSI4 451 aa18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 FUCA2Q9BTY2 467 aa18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 KBTBD4Q9NVX7 518 aa18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 RGL1Q9NZL6 768 aa18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 SLC9A2Q9UBY0 812 aa18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 TUBE1Q9UJT0 475 aa18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 SAMM50Q9Y512 469 aa18.89■□□□□ 0.61
ARFGAP1-220ENST00000547204 SLITRK3O94933 977 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 SMC2O95347 1197 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 MYL1P05976 194 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 GJB1P08034 283 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 SV2BQ7L1I2 683 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 KCNK18Q7Z418 384 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 SCFD2Q8WU76 684 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 STAMQ92783 540 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 MTRQ99707 1265 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 UNC93B1Q9H1C4 597 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 TSPY26PQ9H489 355 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 DDX41Q9UJV9 622 aaKnown RBP18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 GJD2Q9UKL4 321 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 DOCK5Q9H7D0 1870 aa18.88■□□□□ 0.61
ARFGAP1-220ENST00000547204 SNAI1O95863 264 aaPredicted RBP18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 P4HBP07237 508 aaKnown RBP18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 GJA8P48165 433 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 AMPD3Q01432 767 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 TYRO3Q06418 890 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 DPYDQ12882 1025 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 CTTNQ14247 550 aaKnown RBP18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 MCM6Q14566 821 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 TTLL4Q14679 1199 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 CYFIP1Q7L576 1253 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 TPH2Q8IWU9 490 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 SMARCE1Q969G3 411 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 LXNQ9BS40 222 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 KATNBL1Q9H079 304 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 DNM3Q9UQ16 869 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 PCDHA5Q9Y5H7 936 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 PCDHA10Q9Y5I2 948 aa18.87■□□□□ 0.61
ARFGAP1-220ENST00000547204 DOCK3Q8IZD9 2030 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 RBM47A0AV96 593 aaKnown RBP18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 E9PMD0 336 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 ARIH2O95376 493 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 CYP2B6P20813 491 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 ACTR2P61160 394 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 GSE1Q14687 1217 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 NT5DC1Q5TFE4 455 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 CCDC62Q6P9F0 684 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 BANK1Q8NDB2 785 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 SPATA20Q8TB22 786 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 LRRC27Q9C0I9 530 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 ABHD16BQ9H3Z7 469 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 BCAS3Q9H6U6 928 aa18.86■□□□□ 0.61
ARFGAP1-220ENST00000547204 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 GGPS1O95749 300 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 PSAPP07602 524 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 PLA2G4BP0C869 781 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 TXNP10599 105 aaKnown RBP18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 QARSP47897 775 aaKnown RBP18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 SARSP49591 514 aaKnown RBP18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 SP4Q02446 784 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 CUL4BQ13620 913 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 DHX8Q14562 1220 aaKnown RBP18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 STX1AQ16623 288 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 LY6KQ17RY6 165 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 TAPT1Q6NXT6 567 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 MIS18BP1Q6P0N0 1132 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 METTL7BQ6UX53 244 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 U2AF1L4Q8WU68 220 aaKnown RBP18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 NACC1Q96RE7 527 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 BLZF1Q9H2G9 400 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 ZSWIM4Q9H7M6 989 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 PDGFCQ9NRA1 345 aa18.85■□□□□ 0.61
ARFGAP1-220ENST00000547204 SORBS3O60504 671 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 LYPLA2O95372 231 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 EYA4O95677 639 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 HMGCRP04035 888 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 CASP1P29466 404 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 PSMC5P62195 406 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 CELF3Q5SZQ8 465 aaKnown RBP18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 ABHD15Q6UXT9 468 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 GAS2L3Q86XJ1 694 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 GSDMAQ96QA5 445 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 C7orf25Q9BPX7 421 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 TRIM9Q9C026 710 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 MLXIPQ9HAP2 919 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 ANO10Q9NW15 660 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 FLRT1Q9NZU1 646 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 WRAP73Q9P2S5 460 aaPredicted RBP18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 LOXHD1Q8IVV2 1947 aa18.84■□□□□ 0.61
ARFGAP1-220ENST00000547204 BIN1O00499 593 aa18.83■□□□□ 0.61
ARFGAP1-220ENST00000547204 DKC1O60832 514 aaKnown RBP eCLIP18.83■□□□□ 0.61
ARFGAP1-220ENST00000547204 ATG7O95352 703 aa18.83■□□□□ 0.61
ARFGAP1-220ENST00000547204 SSBP05455 408 aaKnown RBP eCLIP18.83■□□□□ 0.611e-10■■■■■ 35.6
ARFGAP1-220ENST00000547204 SUPT20HL2P0C7V6 817 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms