RNA–Protein interactions for RNA: ENST00000547061.5

RACGAP1-208, Transcript of Rac GTPase activating protein 1, human

TSL 3

Gene RACGAP1, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-208	ENST00000547061	RANBP6	O60518	1105 aa	Known RBP	7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	PGK2	P07205	417 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	PDHB	P11177	359 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	MCC	P23508	829 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	EDNRB	P24530	442 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	SMARCA1	P28370	1054 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	RTP1	P59025	263 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	ZNF543	Q08ER8	600 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	SFSWAP	Q12872	951 aa	Known RBP	7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	VPS53	Q5VIR6	699 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	ARMCX2	Q7L311	632 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	SYT9	Q86SS6	491 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	RUFY2	Q8WXA3	655 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	GLT1D1	Q96MS3	346 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	IWS1	Q96ST2	819 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	KRT23	Q9C075	422 aa		7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061	A1CF	Q9NQ94	594 aa	Known RBP	7.53	□□□□□ -1.2
RACGAP1-208	ENST00000547061		A0A0D9SFI3	127 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061		A0A1W2PQ45	241 aa	Predicted RBP	7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061		A0A1W2PQY0	241 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	SHISA8	B8ZZ34	492 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ARVCF	O00192	962 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CTAGE5	O15320	804 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TIMP1	P01033	207 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	IGHD	P01880	384 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CLTB	P09497	229 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ADCYAP1R1	P41586	468 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TLE2	Q04725	743 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	PTPN11	Q06124	597 aa	Predicted RBP	7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TBC1D8B	Q0IIM8	1120 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	KCNA10	Q16322	511 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	IMMT	Q16891	758 aa	Known RBP	7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	C11orf91	Q3C1V1	193 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CCDC144B	Q3MJ40	725 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	DUSP28	Q4G0W2	176 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ASPRV1	Q53RT3	343 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	FAM47A	Q5JRC9	791 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	GJC2	Q5T442	439 aa	Predicted RBP	7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TMEM164	Q5U3C3	297 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	RASIP1	Q5U651	963 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	SYDE2	Q5VT97	1194 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	MCF2L2	Q86YR7	1114 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CCDC144CP	Q8IYA2	1237 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CPXCR1	Q8N123	301 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	FAM227B	Q96M60	508 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	NUP88	Q99567	741 aa	Predicted RBP	7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	LNPK	Q9C0E8	428 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	RAVER2	Q9HCJ3	691 aa	Known RBP	7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	PDLIM7	Q9NR12	457 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	RNF146	Q9NTX7	359 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TBX21	Q9UL17	535 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	SYNRG	Q9UMZ2	1314 aa		7.52	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ELOA3C	A0A087WX78	387 aa	Predicted RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061		A0A0U1RQG5	324 aa	Predicted RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ELOA3D	A6NLF2	546 aa	Predicted RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	SIN3B	O75182	1162 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	PARN	O95453	639 aa	Known RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CD4	P01730	458 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	PFKM	P08237	780 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	SUPT20HL2	P0C7V6	817 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TGFB3	P10600	412 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TAL1	P17542	331 aa	Predicted RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ARSD	P51689	593 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TNFAIP2	Q03169	654 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	FAAP100	Q0VG06	881 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	NMI	Q13287	307 aa	Predicted RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ELOA3B	Q3SY89	546 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	BRDT	Q58F21	947 aa	Predicted RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	PRAMEF19	Q5SWL8	479 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	MFSD5	Q6N075	450 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TAPT1	Q6NXT6	567 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	KCNV1	Q6PIU1	500 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CHSY3	Q70JA7	882 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ZNF589	Q86UQ0	364 aa	Predicted RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	LRRC47	Q8N1G4	583 aa	Known RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TMTC2	Q8N394	836 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ELOA3	Q8NG57	546 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CLEC4D	Q8WXI8	215 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	BHMT	Q93088	406 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	MTMR8	Q96EF0	704 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	MYO19	Q96H55	970 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	STARD7	Q9NQZ5	370 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	DIAPH3	Q9NSV4	1193 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	MTMR10	Q9NXD2	777 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	NOP53	Q9NZM5	478 aa	Known RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	KLK14	Q9P0G3	267 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CNTNAP5	Q8WYK1	1306 aa		7.51	□□□□□ -1.21
RACGAP1-208	ENST00000547061	MYH7	P12883	1935 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	SZT2	Q5T011	3432 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	TRIM43B	A6NCK2	446 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	PGK1	P00558	417 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	ASGR1	P07306	291 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	IDH3A	P50213	366 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	CPT1A	P50416	773 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	PPIG	Q13427	754 aa	Known RBP eCLIP	7.5	□□□□□ -1.21	4e-6	■■□□□ 13.5
RACGAP1-208	ENST00000547061	TRIM60	Q495X7	471 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	SESTD1	Q86VW0	696 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	FAM126B	Q8IXS8	530 aa		7.5	□□□□□ -1.21
RACGAP1-208	ENST00000547061	SCFD2	Q8WU76	684 aa		7.5	□□□□□ -1.21

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