RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 RESP18Q5W5W9 173 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 POTEGQ6S5H5 508 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 POTEEQ6S8J3 1075 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 ZNF668Q96K58 619 aaPredicted RBP12.88□□□□□ -0.35
CHERP-203ENST00000546361 NSRP1Q9H0G5 558 aaKnown RBP12.88□□□□□ -0.35
CHERP-203ENST00000546361 NDST4Q9H3R1 872 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 ATP6V0A4Q9HBG4 840 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 GPBP1L1Q9HC44 474 aaPredicted RBP12.88□□□□□ -0.35
CHERP-203ENST00000546361 UBE2TQ9NPD8 197 aaPredicted RBP12.88□□□□□ -0.35
CHERP-203ENST00000546361 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
CHERP-203ENST00000546361 THAP12O43422 761 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 MYO1EQ12965 1108 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 MESDQ14696 234 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 CLUL1Q15846 466 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 SFR1Q86XK3 245 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 ARPP19P56211 112 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 RASSF7Q02833 373 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 GABPAQ06546 454 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 NFIAQ12857 509 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 TWF2Q6IBS0 349 aaKnown RBP12.88□□□□□ -0.35
CHERP-203ENST00000546361 HDXQ7Z353 690 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 ADAT2Q7Z6V5 191 aaKnown RBP12.88□□□□□ -0.35
CHERP-203ENST00000546361 PNMA8AQ86V59 439 aaPredicted RBP12.88□□□□□ -0.35
CHERP-203ENST00000546361 NEK9Q8TD19 979 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 ZNF302Q9NR11 478 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 NKIRAS1Q9NYS0 192 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 PCDHA10Q9Y5I2 948 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 ASB14A6NK59 587 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 GOLGA8SH3BPF8 625 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 ZBTB24O43167 697 aaPredicted RBP12.87□□□□□ -0.35
CHERP-203ENST00000546361 TGFB2P61812 414 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 SNAPC2Q13487 334 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 SURF1Q15526 300 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 CPLX4Q7Z7G2 160 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 ANKRD13AQ8IZ07 590 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 FBF1Q8TES7 1133 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 SPATA33Q96N06 139 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 NRBP1Q9UHY1 535 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 TXNP10599 105 aaKnown RBP12.87□□□□□ -0.35
CHERP-203ENST00000546361 CXCL9Q07325 125 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 EHHADHQ08426 723 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 MFSD14CQ5VZR4 134 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 RSAD2Q8WXG1 361 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 ALDH8A1Q9H2A2 487 aaPredicted RBP12.87□□□□□ -0.35
CHERP-203ENST00000546361 HAUS2Q9NVX0 235 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 DDX41Q9UJV9 622 aaKnown RBP12.87□□□□□ -0.35
CHERP-203ENST00000546361 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.87□□□□□ -0.35
CHERP-203ENST00000546361 GFPT2O94808 682 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 PDHBP11177 359 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 ATP1A3P13637 1013 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 TCP1P17987 556 aaKnown RBP12.87□□□□□ -0.35
CHERP-203ENST00000546361 PSMC5P62195 406 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
CHERP-203ENST00000546361 PPANQ9NQ55 473 aaKnown RBP12.87□□□□□ -0.35
CHERP-203ENST00000546361 KRIT1O00522 736 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 SLC16A4O15374 487 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 LDHAP00338 332 aaKnown RBP12.86□□□□□ -0.35
CHERP-203ENST00000546361 FAM81BQ96LP2 452 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 LRRC4Q9HBW1 653 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 HYOU1Q9Y4L1 999 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 ARHGEF37A1IGU5 675 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 IVLP07476 585 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 U2AF2P26368 475 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHERP-203ENST00000546361 MXRA7P84157 204 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 ORC2Q13416 577 aaPredicted RBP12.86□□□□□ -0.35
CHERP-203ENST00000546361 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 LXNQ9BS40 222 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
CHERP-203ENST00000546361 PVALEFA0A1B0GWK0 134 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 HOXA7P31268 230 aaPredicted RBP12.86□□□□□ -0.35
CHERP-203ENST00000546361 PHKA2P46019 1235 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 PAK2Q13177 524 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 PDZD4Q76G19 769 aaPredicted RBP12.86□□□□□ -0.35
CHERP-203ENST00000546361 MAP7D3Q8IWC1 876 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 ZNF653Q96CK0 615 aa12.86□□□□□ -0.35
CHERP-203ENST00000546361 DENND3A2RUS2 1198 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 NR3C2P08235 984 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 CAPN2P17655 700 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 RBL2Q08999 1139 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 GOLGA8FQ08AF8 430 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 GOLGA8DPQ0D2H9 430 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 FAM133AQ8N9E0 248 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 VPS18Q9P253 973 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 INPP5FQ9Y2H2 1132 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 CTNND1O60716 968 aaKnown RBP12.85□□□□□ -0.35
CHERP-203ENST00000546361 HPDP32754 393 aaPredicted RBP12.85□□□□□ -0.35
CHERP-203ENST00000546361 ZBED6P86452 979 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 ITIH3Q06033 890 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 DSTYKQ6XUX3 929 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 RHPN2Q8IUC4 686 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 NME8Q8N427 588 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 RAET1EQ8TD07 263 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 RGL1Q9NZL6 768 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 ZNF148Q9UQR1 794 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 TAF6LQ9Y6J9 622 aa12.85□□□□□ -0.35
CHERP-203ENST00000546361 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
CHERP-203ENST00000546361 BCL9O00512 1426 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms