RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 TRIM43Q96BQ3 446 aaPredicted RBP18.97■□□□□ 0.63
LTBR-215ENST00000546296 IGKV6D-21A0A0A0MT36 114 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 KIAA0355O15063 1070 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 CYP2C9P11712 490 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 TXKP42681 527 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 SLC26A2P50443 739 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 ORC2Q13416 577 aaPredicted RBP18.96■□□□□ 0.63
LTBR-215ENST00000546296 CCDC60Q8IWA6 550 aaPredicted RBP18.96■□□□□ 0.63
LTBR-215ENST00000546296 SETD4Q9NVD3 440 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 GABBR1Q9UBS5 961 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 PCDHA12Q9UN75 941 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 TRPC6Q9Y210 931 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 DOCK5Q9H7D0 1870 aa18.96■□□□□ 0.63
LTBR-215ENST00000546296 ZNF200P98182 395 aaPredicted RBP18.95■□□□□ 0.62
LTBR-215ENST00000546296 PPFIA1Q13136 1202 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 NBR1Q14596 966 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 RILPL1Q5EBL4 403 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 PRPF38BQ5VTL8 546 aaKnown RBP18.95■□□□□ 0.62
LTBR-215ENST00000546296 FERMT3Q86UX7 667 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 RDM1Q8NG50 284 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 AFAP1L1Q8TED9 768 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 ATP6V0A1Q93050 837 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 HIPK3Q9H422 1215 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 VAV3Q9UKW4 847 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 TBX21Q9UL17 535 aa18.95■□□□□ 0.62
LTBR-215ENST00000546296 POTEB3A0JP26 581 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 TIMP1P01033 207 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 TOB1P50616 345 aaPredicted RBP18.94■□□□□ 0.62
LTBR-215ENST00000546296 PPP2R5CQ13362 524 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 PLCB4Q15147 1175 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 NCAPH2Q6IBW4 605 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 POTEBQ6S5H4 581 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 TRMT1LQ7Z2T5 733 aaKnown RBP18.94■□□□□ 0.62
LTBR-215ENST00000546296 BRAPQ7Z569 592 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 MTMR9Q96QG7 549 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 PPP1R12CQ9BZL4 782 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 TMEM60Q9H2L4 133 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 TTC12Q9H892 705 aaPredicted RBP18.94■□□□□ 0.62
LTBR-215ENST00000546296 PCDH10Q9P2E7 1040 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 NRCAMQ92823 1304 aa18.94■□□□□ 0.62
LTBR-215ENST00000546296 SCN10AQ9Y5Y9 1956 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 STX6O43752 255 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 OR52Z1P0C646 297 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 IGBP1P78318 339 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 MDM2Q00987 491 aaPredicted RBP18.93■□□□□ 0.62
LTBR-215ENST00000546296 GRIK4Q16099 956 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 B3GNT9Q6UX72 402 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 CCDC155Q8N6L0 562 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 RETREG2Q8NC44 543 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 BADQ92934 168 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 PCDHB6Q9Y5E3 794 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 MAFBQ9Y5Q3 323 aaPredicted RBP18.93■□□□□ 0.62
LTBR-215ENST00000546296 ALPK3Q96L96 1907 aa18.93■□□□□ 0.62
LTBR-215ENST00000546296 PDE4DIPQ5VU43 2346 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 RRN3P2A6NIE6 340 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 EML1O00423 815 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 HBP1O60381 514 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 INSRRP14616 1297 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 CYP2C18P33260 490 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 MAGEA10P43363 369 aaPredicted RBP18.92■□□□□ 0.62
LTBR-215ENST00000546296 PTK7Q13308 1070 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 BFSP2Q13515 415 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 HIC1Q14526 733 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 ATP8B4Q8TF62 1192 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 NOC4LQ9BVI4 516 aaKnown RBP18.92■□□□□ 0.62
LTBR-215ENST00000546296 NRBP2Q9NSY0 501 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 MTMR6Q9Y217 621 aa18.92■□□□□ 0.62
LTBR-215ENST00000546296 TREHO43280 583 aa18.91■□□□□ 0.62
LTBR-215ENST00000546296 PDIA4P13667 645 aaKnown RBP18.91■□□□□ 0.62
LTBR-215ENST00000546296 ITGB8P26012 769 aa18.91■□□□□ 0.62
LTBR-215ENST00000546296 PTGDRQ13258 359 aa18.91■□□□□ 0.62
LTBR-215ENST00000546296 EPHA7Q15375 998 aa18.91■□□□□ 0.62
LTBR-215ENST00000546296 TMEM266Q2M3C6 531 aa18.91■□□□□ 0.62
LTBR-215ENST00000546296 LMBR1Q8WVP7 490 aa18.91■□□□□ 0.62
LTBR-215ENST00000546296 FAM167AQ96KS9 214 aa18.91■□□□□ 0.62
LTBR-215ENST00000546296 ATP4AP20648 1035 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 HOXC8P31273 242 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 TECP42680 631 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 CCL23P55773 120 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 PSMC5P62195 406 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 UGCGQ16739 394 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 ZNF484Q5JVG2 852 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 MFSD5Q6N075 450 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 TMEM199Q8N511 208 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 C4orf32Q8N8J7 132 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 BANK1Q8NDB2 785 aa18.9■□□□□ 0.62
LTBR-215ENST00000546296 BBXQ8WY36 941 aaPredicted RBP18.9■□□□□ 0.62
LTBR-215ENST00000546296 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.9■□□□□ 0.62
LTBR-215ENST00000546296 DDX11L8A8MPP1 907 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 LAD1O00515 517 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 DKC1O60832 514 aaKnown RBP eCLIP18.89■□□□□ 0.61
LTBR-215ENST00000546296 OATP04181 439 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 P4HBP07237 508 aaKnown RBP18.89■□□□□ 0.61
LTBR-215ENST00000546296 QARSP47897 775 aaKnown RBP18.89■□□□□ 0.61
LTBR-215ENST00000546296 PRKCEQ02156 737 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 SPIRE1Q08AE8 756 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 RESTQ13127 1097 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 CHRDL2Q6WN34 429 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 SERINC5Q86VE9 423 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 CAGE1Q8TC20 777 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms