RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 BLZF1Q9H2G9 400 aa7.15□□□□□ -1.26
SNHG1-225ENST00000545920 GOLGA6AQ9NYA3 693 aa7.15□□□□□ -1.26
SNHG1-225ENST00000545920 STIM2Q9P246 746 aa7.15□□□□□ -1.26
SNHG1-225ENST00000545920 ABCF2Q9UG63 623 aa7.15□□□□□ -1.26
SNHG1-225ENST00000545920 NIP7Q9Y221 180 aaKnown RBP eCLIP7.15□□□□□ -1.261e-323■■■■■ 31
SNHG1-225ENST00000545920 MAST2Q6P0Q8 1798 aa7.15□□□□□ -1.27
SNHG1-225ENST00000545920 NUP98P52948 1817 aa7.15□□□□□ -1.27
SNHG1-225ENST00000545920 ANKRD33BA6NCL7 494 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 STXBP3O00186 592 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 PRDM1O75626 825 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 SNRPBP14678 240 aaKnown RBP7.14□□□□□ -1.27
SNHG1-225ENST00000545920 GCFC2P16383 781 aaKnown RBP7.14□□□□□ -1.27
SNHG1-225ENST00000545920 FLT1P17948 1338 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 HIBADHP31937 336 aaKnown RBP7.14□□□□□ -1.27
SNHG1-225ENST00000545920 CRKLP46109 303 aaKnown RBP7.14□□□□□ -1.27
SNHG1-225ENST00000545920 DRP2Q13474 957 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 CACNA1SQ13698 1873 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 PPP2R5EQ16537 467 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 SPDYCQ5MJ68 293 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 SOGA3Q5TF21 947 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 CCDC181Q5TID7 509 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 C12orf60Q5U649 245 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 NCAPH2Q6IBW4 605 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 RCSD1Q6JBY9 416 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 LRIG3Q6UXM1 1119 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 ARMC9Q7Z3E5 817 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 NEK8Q86SG6 692 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 CREG2Q8IUH2 290 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 SPATA4Q8NEY3 305 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 MMS19Q96T76 1030 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 CAPS2Q9BXY5 557 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 JADE2Q9NQC1 790 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 BIN2Q9UBW5 565 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-225ENST00000545920 PCDHA6Q9UN73 950 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 MINPP1Q9UNW1 487 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 SIK3Q9Y2K2 1263 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 GDAQ9Y2T3 454 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 PCDHB11Q9Y5F2 797 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 PCDHA8Q9Y5H6 950 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 PCDHA13Q9Y5I0 950 aa7.14□□□□□ -1.27
SNHG1-225ENST00000545920 BZW2Q9Y6E2 419 aaKnown RBP7.14□□□□□ -1.27
SNHG1-225ENST00000545920 STRCP1A6NGW2 1772 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 KDM3AQ9Y4C1 1321 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 HMGB1P1B2RPK0 211 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-225ENST00000545920 B4DLN1 442 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 RNF225M0QZC1 329 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-225ENST00000545920 PES1O00541 588 aaKnown RBP7.13□□□□□ -1.27
SNHG1-225ENST00000545920 EIF3HO15372 352 aaKnown RBP eCLIP7.13□□□□□ -1.27
SNHG1-225ENST00000545920 C21orf2O43822 256 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 GFPT2O94808 682 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 PLCG1P19174 1290 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 NOVP48745 357 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 KIF11P52732 1056 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 TNNC1P63316 161 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 SH3BP2P78314 561 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 ASIC1P78348 528 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 MECOMQ03112 1051 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 CUL1Q13616 776 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 AGERQ15109 404 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 PLCB4Q15147 1175 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 CCDC96Q2M329 555 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 SLC9C1Q4G0N8 1177 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 MIIPQ5JXC2 388 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 ADGRA1Q86SQ6 560 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 TADA2BQ86TJ2 420 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 CMTR1Q8N1G2 835 aaKnown RBP7.13□□□□□ -1.27
SNHG1-225ENST00000545920 IPO4Q8TEX9 1081 aaKnown RBP7.13□□□□□ -1.27
SNHG1-225ENST00000545920 P3H4Q92791 437 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 MRRFQ96E11 262 aaKnown RBP7.13□□□□□ -1.27
SNHG1-225ENST00000545920 RRP36Q96EU6 259 aaKnown RBP7.13□□□□□ -1.27
SNHG1-225ENST00000545920 CEP89Q96ST8 783 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 OSBPL9Q96SU4 736 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 MXD3Q9BW11 206 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 NDST4Q9H3R1 872 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 DEF6Q9H4E7 631 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 CEP72Q9P209 647 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 SEC63Q9UGP8 760 aaKnown RBP7.13□□□□□ -1.27
SNHG1-225ENST00000545920 SWAP70Q9UH65 585 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 MAD2L2Q9UI95 211 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 LEMD3Q9Y2U8 911 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 ITGB4P16144 1822 aa7.13□□□□□ -1.27
SNHG1-225ENST00000545920 SCN7AQ01118 1682 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 PLIN4Q96Q06 1357 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 MYO3BQ8WXR4 1341 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 CNTNAP4Q9C0A0 1308 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 MYH6P13533 1939 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 LOC102724428A0A0B4J2F2 783 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 AKR1B10O60218 316 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 N4BP1O75113 896 aaKnown RBP7.12□□□□□ -1.27
SNHG1-225ENST00000545920 SERPING1P05155 500 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 VAMP1P23763 118 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 CASP1P29466 404 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 CDC25AP30304 524 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 MAGEA1P43355 309 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 NOP2P46087 812 aaKnown RBP7.12□□□□□ -1.27
SNHG1-225ENST00000545920 IRAK1P51617 712 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 SIK1P57059 783 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 RPS8P62241 208 aaKnown RBP7.12□□□□□ -1.27
SNHG1-225ENST00000545920 DYNLL1P63167 89 aaKnown RBP7.12□□□□□ -1.27
SNHG1-225ENST00000545920 FKBP3Q00688 224 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms