RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 UBA5Q9GZZ9 404 aa4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 RNF41Q9H4P4 317 aaPredicted RBP4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 EPHX3Q9H6B9 360 aa4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 COL20A1Q9P218 1284 aa4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 HDAC6Q9UBN7 1215 aa4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 GTF2IRD1Q9UHL9 959 aa4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 DDX41Q9UJV9 622 aaKnown RBP4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 RBM19Q9Y4C8 960 aaKnown RBP4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 COL4A4P53420 1690 aaPredicted RBP4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 CHD9Q3L8U1 2897 aa4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 PTPRSQ13332 1948 aa4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 TET1Q8NFU7 2136 aa4.24□□□□□ -1.73
LPCAT3-212ENST00000545459 TRIP12Q14669 1992 aaPredicted RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 NCOR1O75376 2440 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 KIAA1217Q5T5P2 1943 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ABHD14A-ACY1A0A1B0GW23 586 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 LINC01553A4QN01 128 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 HAS3O00219 553 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ZNF213O14771 459 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 DHX16O60231 1041 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 NBNO60934 754 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 PPFIA4O75335 1185 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 EIF3JO75822 258 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 GJB5O95377 273 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 F2P00734 622 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 CXCL10P02778 98 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 NR3C2P08235 984 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 PARP1P09874 1014 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ZNF286BP0CG31 522 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 EIF2AK2P19525 551 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 SDSP20132 328 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 NT5C2P49902 561 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 MFAP1P55081 439 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 RRP1P56182 461 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ERVK-21P61565 698 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 NR5A1Q13285 461 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 PTK7Q13308 1070 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 HDAC1Q13547 482 aaPredicted RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 LAMC2Q13753 1193 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 IKBKEQ14164 716 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 MBTPS1Q14703 1052 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 KIAA0753Q2KHM9 967 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 TCTN1Q2MV58 587 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 TRIM71Q2Q1W2 868 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 QRICH1Q2TAL8 776 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 TSGA10IPQ3SY00 556 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ASPRV1Q53RT3 343 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 TMEM31Q5JXX7 168 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ZNF618Q5T7W0 954 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ARHGEF16Q5VV41 709 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 B4GALNT3Q6L9W6 998 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 FAM117BQ6P1L5 589 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ZNF598Q86UK7 904 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 IQCA1Q86XH1 822 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 FBXO11Q86XK2 927 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 DHX37Q8IY37 1157 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ENAHQ8N8S7 591 aaPredicted RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 PPTC7Q8NI37 304 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 FAM200AQ8TCP9 573 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 GDPD5Q8WTR4 605 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 RILPL2Q969X0 211 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 EMID1Q96A84 441 aaPredicted RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 TGS1Q96RS0 853 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ZSCAN10Q96SZ4 725 aaPredicted RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 RAD9AQ99638 391 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 ALG1Q9BT22 464 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 LRFN3Q9BTN0 628 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 KATNAL1Q9BW62 490 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 KAT14Q9H8E8 782 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 JMJD4Q9H9V9 463 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 SUGCTQ9HAC7 445 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 VAT1LQ9HCJ6 419 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 DNAAF2Q9NVR5 837 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 LMCD1Q9NZU5 365 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 MTUS1Q9ULD2 1270 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 MRPL11Q9Y3B7 192 aaKnown RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 PCDHB11Q9Y5F2 797 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 MRVI1Q9Y6F6 885 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 V9GY48 417 aaPredicted RBP4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 LAMA4Q16363 1823 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 BDP1A6H8Y1 2624 aa4.23□□□□□ -1.73
LPCAT3-212ENST00000545459 EMSYQ7Z589 1322 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 B4E1Z4 1266 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 RBAK-RBAKDNI3L0D1 243 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 OPLAHO14841 1288 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 SIAH2O43255 324 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 EFCAB14O75071 495 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 LGR5O75473 907 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 RGS20O76081 388 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 BRD1O95696 1058 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 CFBP00751 764 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 AMHP03971 560 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 MYCLP12524 364 aaPredicted RBP4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 HOXD8P13378 290 aaPredicted RBP4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 HSD17B4P51659 736 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 RAB15P59190 212 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 ZNF200P98182 395 aaPredicted RBP4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 GHRHRQ02643 423 aa4.22□□□□□ -1.73
LPCAT3-212ENST00000545459 HSDL1Q3SXM5 330 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms