RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 TTYH3Q9C0H2 523 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 MRPL44Q9H9J2 332 aaKnown RBP18.38■□□□□ 0.53
CHFR-224ENST00000545046 RNF146Q9NTX7 359 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 CETN3O15182 167 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 NKRFO15226 690 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHFR-224ENST00000545046 FAM13AO94988 1023 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 OAZ1P54368 228 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 GNG11P61952 73 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 MRPS9P82933 396 aaKnown RBP18.38■□□□□ 0.53
CHFR-224ENST00000545046 ADAM9Q13443 819 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 MTMR1Q13613 665 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 KNOP1Q1ED39 458 aaKnown RBP18.38■□□□□ 0.53
CHFR-224ENST00000545046 C1orf186Q6ZWK4 172 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 EPM2AIP1Q7L775 607 aaPredicted RBP18.38■□□□□ 0.53
CHFR-224ENST00000545046 TSC1Q92574 1164 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 RMDN3Q96TC7 470 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 AGO4Q9HCK5 861 aaKnown RBP18.38■□□□□ 0.53
CHFR-224ENST00000545046 KCND2Q9NZV8 630 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 PKD2L1Q9P0L9 805 aa18.38■□□□□ 0.53
CHFR-224ENST00000545046 RASSF10A6NK89 507 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 RSPH10B2B2RC85 870 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 RSPH10BP0C881 870 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 MYCLP12524 364 aaPredicted RBP18.37■□□□□ 0.53
CHFR-224ENST00000545046 CASQ1P31415 396 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 CASP5P51878 434 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 ARHGEF16Q5VV41 709 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 WNK4Q96J92 1243 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 LXNQ9BS40 222 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 OLFML3Q9NRN5 406 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 TBC1D22BQ9NU19 505 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 AGPAT5Q9NUQ2 364 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 MYH11P35749 1972 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 CALUO43852 315 aaPredicted RBP18.37■□□□□ 0.53
CHFR-224ENST00000545046 RBM10P98175 930 aaKnown RBP18.37■□□□□ 0.53
CHFR-224ENST00000545046 PRKG1Q13976 671 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 SNRNP48Q6IEG0 339 aaKnown RBP18.37■□□□□ 0.53
CHFR-224ENST00000545046 CATSPERGQ6ZRH7 1159 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 BANK1Q8NDB2 785 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 CHP1Q99653 195 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 PXMP2Q9NR77 195 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 TRAF3IP3Q9Y228 551 aa18.37■□□□□ 0.53
CHFR-224ENST00000545046 EPN1Q9Y6I3 576 aaPredicted RBP18.37■□□□□ 0.53
CHFR-224ENST00000545046 SSC5DA1L4H1 1573 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 PDXKO00764 312 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 ZBTB39O15060 712 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 DDNO94850 711 aaPredicted RBP18.36■□□□□ 0.53
CHFR-224ENST00000545046 GCNT3O95395 438 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 P4HBP07237 508 aaKnown RBP18.36■□□□□ 0.53
CHFR-224ENST00000545046 MYBP10242 640 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 MARSP56192 900 aaKnown RBP18.36■□□□□ 0.53
CHFR-224ENST00000545046 ZC3H3Q8IXZ2 948 aaKnown RBP18.36■□□□□ 0.53
CHFR-224ENST00000545046 MYCT1Q8N699 235 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 PDCD2LQ9BRP1 358 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 FHDC1Q9C0D6 1143 aaPredicted RBP18.36■□□□□ 0.53
CHFR-224ENST00000545046 MMRN2Q9H8L6 949 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 L2HGDHQ9H9P8 463 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 LZTFL1Q9NQ48 299 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 ADARB2Q9NS39 739 aaKnown RBP18.36■□□□□ 0.53
CHFR-224ENST00000545046 ADAMTS5Q9UNA0 930 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 SIK3Q9Y2K2 1263 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 AFG3L2Q9Y4W6 797 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 RIPK3Q9Y572 518 aa18.36■□□□□ 0.53
CHFR-224ENST00000545046 ARHGEF35A5YM69 484 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 DHX15O43143 795 aaKnown RBP18.35■□□□□ 0.53
CHFR-224ENST00000545046 USP2O75604 605 aaPredicted RBP18.35■□□□□ 0.53
CHFR-224ENST00000545046 PRPF6O94906 941 aaKnown RBP18.35■□□□□ 0.53
CHFR-224ENST00000545046 SLU7O95391 586 aaKnown RBP18.35■□□□□ 0.53
CHFR-224ENST00000545046 BAATQ14032 418 aaPredicted RBP18.35■□□□□ 0.53
CHFR-224ENST00000545046 ACRBPQ8NEB7 543 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 REPS2Q8NFH8 660 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHFR-224ENST00000545046 HOXC10Q9NYD6 342 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 SEL1LQ9UBV2 794 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 SAMM50Q9Y512 469 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 SFI1A8K8P3 1242 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 NDUFA10O95299 355 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 ERCC3P19447 782 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 NR2F2P24468 414 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 MEA1Q16626 185 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 BMT2Q1RMZ1 405 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 ARHGAP29Q52LW3 1261 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 XRRA1Q6P2D8 792 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 WDR59Q6PJI9 974 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 DCPSQ96C86 337 aaKnown RBP18.35■□□□□ 0.53
CHFR-224ENST00000545046 ZSWIM4Q9H7M6 989 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 PARVGQ9HBI0 331 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 POLD4Q9HCU8 107 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
CHFR-224ENST00000545046 WRAP73Q9P2S5 460 aaPredicted RBP18.35■□□□□ 0.53
CHFR-224ENST00000545046 FAM184BQ9ULE4 1060 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 ODF2LQ9ULJ1 636 aa18.35■□□□□ 0.53
CHFR-224ENST00000545046 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHFR-224ENST00000545046 KIF5CO60282 957 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 ITGB3BPQ13352 177 aaPredicted RBP18.34■□□□□ 0.53
CHFR-224ENST00000545046 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 RBM46Q8TBY0 533 aaKnown RBP18.34■□□□□ 0.53
CHFR-224ENST00000545046 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 EIF3DO15371 548 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHFR-224ENST00000545046 URI1O94763 535 aaPredicted RBP18.34■□□□□ 0.53
CHFR-224ENST00000545046 RPL13P26373 211 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms