RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 MTG1Q9BT17 334 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-224ENST00000544990 PDRG1Q9NUG6 133 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 TMEM39AQ9NV64 488 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 DDX41Q9UJV9 622 aaKnown RBP8.45□□□□□ -1.06
CPSF7-224ENST00000544990 CEP290O15078 2479 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 NID2Q14112 1375 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 SMCO2A6NFE2 343 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 CPLX1O14810 134 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 FOSP01100 380 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 SCG2P13521 617 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 RAG1P15918 1043 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 PTGS1P23219 599 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 PDIA3P30101 505 aaKnown RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 MAGEA10P43363 369 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 ADCY7P51828 1080 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 SH3BP2P78314 561 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 CCT2P78371 535 aaKnown RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 PURAQ00577 322 aaKnown RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 FAAP100Q0VG06 881 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 TOB2Q14106 344 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 ANKRD1Q15327 319 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 DGKDQ16760 1214 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 PFKFB3Q16875 520 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 PCNX4Q63HM2 1172 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 WWC2Q6AWC2 1192 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 CPLX2Q6PUV4 134 aaKnown RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 SH3RF1Q7Z6J0 888 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 NLRX1Q86UT6 975 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 KCTD17Q8N5Z5 321 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 SLC43A3Q8NBI5 491 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 IL31RAQ8NI17 732 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 FAM174AQ8TBP5 190 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 RNF26Q9BY78 433 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 UPF3BQ9BZI7 483 aaKnown RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 UBE2OQ9C0C9 1292 aaKnown RBP8.44□□□□□ -1.06
CPSF7-224ENST00000544990 MLXIPQ9HAP2 919 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 RIC8AQ9NPQ8 531 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 PDLIM7Q9NR12 457 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 BARHL2Q9NY43 387 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 PCDHA6Q9UN73 950 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 PCDHA8Q9Y5H6 950 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 FRMPD4Q14CM0 1322 aa8.44□□□□□ -1.06
CPSF7-224ENST00000544990 TRIM43BA6NCK2 446 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 STXBP3O00186 592 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 KIAA0355O15063 1070 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 FIBPO43427 364 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 RGS20O76081 388 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 MMP3P08254 477 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 SUPT20HL2P0C7V6 817 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 IFNAR1P17181 557 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 GNA11P29992 359 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 ICAM3P32942 547 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 RPIAP49247 311 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 WNT7BP56706 349 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 MRPS9P82933 396 aaKnown RBP8.43□□□□□ -1.06
CPSF7-224ENST00000544990 ARHGAP1Q07960 439 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 SSRP1Q08945 709 aaKnown RBP8.43□□□□□ -1.06
CPSF7-224ENST00000544990 NEDD9Q14511 834 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 UBE2SQ16763 222 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 EML3Q32P44 896 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 CELF3Q5SZQ8 465 aaKnown RBP8.43□□□□□ -1.06
CPSF7-224ENST00000544990 MCTP2Q6DN12 878 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 FAM126BQ8IXS8 530 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 TRIM22Q8IYM9 498 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 PLPP7Q8NBV4 271 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 AFG1LQ8WV93 481 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 EMID1Q96A84 441 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-224ENST00000544990 TRIM43Q96BQ3 446 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-224ENST00000544990 CDHR1Q96JP9 859 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 INPP4AQ96PE3 977 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-224ENST00000544990 ALDH8A1Q9H2A2 487 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-224ENST00000544990 PRO3102Q9H379 93 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 C6orf50Q9HD87 102 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 RTEL1Q9NZ71 1219 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 USTQ9Y2C2 406 aa8.43□□□□□ -1.06
CPSF7-224ENST00000544990 ESYT2A0FGR8 921 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 SPATA31C2B4DYI2 1134 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 MAFGO15525 162 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 PPFIA4O75335 1185 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 ATG7O95352 703 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 GGPS1O95749 300 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 TIMP1P01033 207 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 CD4P01730 458 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 VARSP26640 1264 aaKnown RBP8.42□□□□□ -1.06
CPSF7-224ENST00000544990 PSMC6P62333 389 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 PTPN11Q06124 597 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-224ENST00000544990 AP3B2Q13367 1082 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 NTRK3Q16288 839 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 FAM47CQ5HY64 1035 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 NFRKBQ6P4R8 1299 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 TDHQ8IZJ6 230 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 GIMAP8Q8ND71 665 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-224ENST00000544990 CCDC148Q8NFR7 591 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 PPTC7Q8NI37 304 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 BADQ92934 168 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 PHKBQ93100 1093 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 GPRASP2Q96D09 838 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 SPATA33Q96N06 139 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 SENP7Q9BQF6 1050 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms