RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 NONOQ15233 471 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■□ 22.3
HDAC4-216ENST00000544989 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 PRR16Q569H4 304 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
HDAC4-216ENST00000544989 RASGRP4Q8TDF6 673 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 TBCKQ8TEA7 893 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 LMBR1Q8WVP7 490 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 TIFAQ96CG3 184 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 RIT2Q99578 217 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 PHF20Q9BVI0 1012 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 SETD4Q9NVD3 440 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 TANC1Q9C0D5 1861 aa13.39□□□□□ -0.27
HDAC4-216ENST00000544989 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-216ENST00000544989 CYP3A7-CYP3A51PA0A087WV96 503 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 IGKV6D-21A0A0A0MT36 114 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 CCDC194A0A1B0GVG4 234 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 ABHD14A-ACY1A0A1B0GW23 586 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 MBLAC1A4D2B0 266 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-216ENST00000544989 KIF28PB7ZC32 967 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 BACH1O14867 736 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 TREHO43280 583 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 SEC24BO95487 1268 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 PSAPP07602 524 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 CYP3A7P24462 503 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 KCNJ6P48051 423 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 ZNF200P98182 395 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-216ENST00000544989 GRIK4Q16099 956 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 ME3Q16798 604 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 Q4G0T1 1027 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 ZNF618Q5T7W0 954 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 ABHD15Q6UXT9 468 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 ZSCAN31Q96LW9 406 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-216ENST00000544989 SEMA6BQ9H3T3 888 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 CXXC1Q9P0U4 656 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-216ENST00000544989 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 LIMCH1Q9UPQ0 1083 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 TRPC6Q9Y210 931 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 DOCK5Q9H7D0 1870 aa13.38□□□□□ -0.27
HDAC4-216ENST00000544989 POTEB3A0JP26 581 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 WDR64B1ANS9 1081 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 M0R2N6 131 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 DHX15O43143 795 aaKnown RBP13.37□□□□□ -0.27
HDAC4-216ENST00000544989 HBP1O60381 514 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 GCFC2P16383 781 aaKnown RBP13.37□□□□□ -0.27
HDAC4-216ENST00000544989 MARK3P27448 753 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 SFNP31947 248 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 TRIM29Q14134 588 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 IKBKEQ14164 716 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 POTEBQ6S5H4 581 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 RDM1Q8NG50 284 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 APBB2Q92870 758 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 VWCEQ96DN2 955 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 ZNF302Q9NR11 478 aa13.37□□□□□ -0.27
HDAC4-216ENST00000544989 SH2B1Q9NRF2 756 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-216ENST00000544989 COL1A2P08123 1366 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 M0QZ92 97 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 DDX39AO00148 427 aaKnown RBP13.36□□□□□ -0.27
HDAC4-216ENST00000544989 GAS7O60861 476 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 NBNO60934 754 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 CCNE2O96020 404 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 INSRRP14616 1297 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 RBM25P49756 843 aaKnown RBP13.36□□□□□ -0.27
HDAC4-216ENST00000544989 JAK3P52333 1124 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 HIC1Q14526 733 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 PLCB4Q15147 1175 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 NPY5RQ15761 445 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 FAM26DQ5JW98 314 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 PDXDC2PQ6P474 469 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 TRAF7Q6Q0C0 670 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 NME8Q8N427 588 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 ATP8B4Q8TF62 1192 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 SEPT8Q92599 483 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 LENG9Q96B70 501 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 FAM167AQ96KS9 214 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 PCYT2Q99447 389 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 LLPHQ9BRT6 129 aaKnown RBP13.36□□□□□ -0.27
HDAC4-216ENST00000544989 TEKT3Q9BXF9 490 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 ZNF576Q9H609 170 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 SLC28A3Q9HAS3 691 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 CEP131Q9UPN4 1083 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 TELO2Q9Y4R8 837 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 SAMM50Q9Y512 469 aa13.36□□□□□ -0.27
HDAC4-216ENST00000544989 MSH4O15457 936 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 CTDNEP1O95476 244 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 KRT2P35908 639 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 HMGN5P82970 282 aaKnown RBP13.35□□□□□ -0.27
HDAC4-216ENST00000544989 RABEP1Q15276 862 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 ZNF484Q5JVG2 852 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 IER5Q5VY09 327 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 PPP4R3AQ6IN85 833 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 NEK8Q86SG6 692 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 NECAB1Q8N987 351 aa13.35□□□□□ -0.27
HDAC4-216ENST00000544989 NSUN7Q8NE18 718 aaKnown RBP13.35□□□□□ -0.27
HDAC4-216ENST00000544989 BBXQ8WY36 941 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-216ENST00000544989 SLC5A5Q92911 643 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms