RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 AFAP1L1Q8TED9 768 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 PPP1R13LQ8WUF5 828 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 GBP4Q96PP9 640 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CTAGE1Q96RT6 745 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 TMUB1Q9BVT8 246 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 C1QTNF1Q9BXJ1 281 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 FTOQ9C0B1 505 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDCA3-209ENST00000544610 FOXP1Q9H334 677 aaPredicted RBP7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CERS4Q9HA82 394 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CDHR5Q9HBB8 845 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 COG5Q9UP83 839 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 NOD1Q9Y239 953 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CNTNAP5Q8WYK1 1306 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 SCN5AQ14524 2016 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 PNMA6FA0A0J9YX94 578 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 KIF28PB7ZC32 967 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 LPXNO60711 386 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 PARNO95453 639 aaKnown RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 MMP3P08254 477 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 SCG2P13521 617 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 U2AF2P26368 475 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 PLA2G5P39877 138 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 WDR5P61964 334 aaKnown RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 ARHGAP1Q07960 439 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 STK3Q13188 491 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 GRB10Q13322 594 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 GPNMBQ14956 572 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 SAFBQ15424 915 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 CDC37Q16543 378 aaPredicted RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 PTGISQ16647 500 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 USH1GQ495M9 461 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 KRT40Q6A162 431 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 GDF6Q6KF10 455 aaPredicted RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 SRBD1Q8N5C6 995 aaKnown RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 DAGLBQ8NCG7 672 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 BICD2Q8TD16 824 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 AFG1LQ8WV93 481 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 ARNTL2Q8WYA1 636 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 KAT2BQ92831 832 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 EMID1Q96A84 441 aaPredicted RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 RRP36Q96EU6 259 aaKnown RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 C8orf76Q96K31 380 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 ALG1Q9BT22 464 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 NCOA5Q9HCD5 579 aaKnown RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 SEC63Q9UGP8 760 aaKnown RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 NAP1L2Q9ULW6 460 aaPredicted RBP7.5□□□□□ -1.21
CDCA3-209ENST00000544610 MTMR6Q9Y217 621 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 ABCB11O95342 1321 aa7.5□□□□□ -1.21
CDCA3-209ENST00000544610 MYH6P13533 1939 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 PTPRSQ13332 1948 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 LCHNA4D1U4 455 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 GOLGA6L22H0YM25 854 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 H3BQV1 296 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 ZBTB5O15062 677 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 MAP3K7O43318 606 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 TLL1O43897 1013 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 JAK2O60674 1132 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 F13A1P00488 732 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 F2P00734 622 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 GH1P01241 217 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 CXCL10P02778 98 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 MMP1P03956 469 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 GOLGA8HP0CJ92 632 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 SELPP16109 830 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 GNA11P29992 359 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 KCNJ6P48051 423 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 TRAPPC10P48553 1259 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 ORC2Q13416 577 aaPredicted RBP7.49□□□□□ -1.21
CDCA3-209ENST00000544610 PKN1Q16512 942 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 LY6KQ17RY6 165 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 CNKSR3Q6P9H4 555 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 LRRC8DQ7L1W4 858 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 SPRED2Q7Z698 418 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 SYTL5Q8TDW5 730 aaPredicted RBP7.49□□□□□ -1.21
CDCA3-209ENST00000544610 NSUN6Q8TEA1 469 aaKnown RBP7.49□□□□□ -1.21
CDCA3-209ENST00000544610 DHX38Q92620 1227 aaKnown RBP7.49□□□□□ -1.21
CDCA3-209ENST00000544610 HLA-CQ95604 372 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 IWS1Q96ST2 819 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 SLC26A6Q9BXS9 759 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 ZMYND12Q9H0C1 365 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 CPVLQ9H3G5 476 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 BRMS1Q9HCU9 246 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 BARHL2Q9NY43 387 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 MAP3K20Q9NYL2 800 aaKnown RBP7.49□□□□□ -1.21
CDCA3-209ENST00000544610 COL20A1Q9P218 1284 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 CFAP45Q9UL16 551 aa7.49□□□□□ -1.21
CDCA3-209ENST00000544610 DDX11L8A8MPP1 907 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 HAS3O00219 553 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 CYTH3O43739 400 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 NBNO60934 754 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 GJB5O95377 273 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 BMP15O95972 392 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 CKBP12277 381 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 CHMP4BP1P59074 171 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 DEFB103AP81534 67 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 GHRHRQ02643 423 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 STXBP2Q15833 593 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 DGKDQ16760 1214 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 TCTN1Q2MV58 587 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms