RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CCDC85BQ15834 202 aaPredicted RBP16.61■□□□□ 0.25
CHD4-210ENST00000544040 C1orf146Q5VVC0 180 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 VSTM4Q8IW00 320 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 NR1H4Q96RI1 486 aaPredicted RBP16.61■□□□□ 0.25
CHD4-210ENST00000544040 GAP43P17677 238 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 PHKA1P46020 1223 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 KLC3Q6P597 504 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 TOGARAM2Q6ZUX3 1019 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 DACH2Q96NX9 599 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 MTRQ99707 1265 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 ING2Q9H160 280 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 RAP1GDS1P52306 607 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 ADCY2Q08462 1091 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 ARID5BQ14865 1188 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 COA7Q96BR5 231 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 ZFP69BQ9UJL9 534 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 MED7O43513 233 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
CHD4-210ENST00000544040 DYNLL1P63167 89 aaKnown RBP16.61■□□□□ 0.25
CHD4-210ENST00000544040 ZNF589Q86UQ0 364 aaPredicted RBP16.61■□□□□ 0.25
CHD4-210ENST00000544040 CEP170P1Q96L14 293 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 PIGSQ96S52 555 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 CCDC151A5D8V7 595 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 CREB3O43889 395 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 CD2BP2O95400 341 aaKnown RBP16.61■□□□□ 0.25
CHD4-210ENST00000544040 ABI1Q8IZP0 508 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 NSUN7Q8NE18 718 aaKnown RBP16.61■□□□□ 0.25
CHD4-210ENST00000544040 CCHCR1Q8TD31 782 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.61■□□□□ 0.252e-6■■■■□ 22
CHD4-210ENST00000544040 TTC1Q99614 292 aa16.61■□□□□ 0.25
CHD4-210ENST00000544040 ZC3H12BQ5HYM0 836 aaKnown RBP16.6■□□□□ 0.25
CHD4-210ENST00000544040 RWDD4Q6NW29 188 aaKnown RBP16.6■□□□□ 0.25
CHD4-210ENST00000544040 ZNF710Q8N1W2 664 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 CUEDC2Q9H467 287 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 L3MBTL1Q9Y468 752 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 DCTN3O75935 186 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 KCNA6P17658 529 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 UNC5CLQ8IV45 518 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 SSH3Q8TE77 659 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 SOS2Q07890 1332 aaPredicted RBP16.6■□□□□ 0.25
CHD4-210ENST00000544040 CLRN2A0PK11 232 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
CHD4-210ENST00000544040 LRRC4Q9HBW1 653 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 GTSE1Q9NYZ3 720 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 UBE2SQ16763 222 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 MIS18BP1Q6P0N0 1132 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 SLC12A6Q9UHW9 1150 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 SUGT1Q9Y2Z0 365 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 SNX24Q9Y343 169 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 LAD1O00515 517 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 COPEO14579 308 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 SLC7A3Q8WY07 619 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 BEGAINQ9BUH8 593 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 HEMGNQ9BXL5 484 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 EMILIN3Q9NT22 766 aa16.6■□□□□ 0.25
CHD4-210ENST00000544040 MTERF2Q49AM1 385 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 SIX6OS1Q8N1H7 587 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 POLR3EQ9NVU0 708 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 GGCXP38435 758 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 RANBP1P43487 201 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 MDM2Q00987 491 aaPredicted RBP16.59■□□□□ 0.25
CHD4-210ENST00000544040 TRIM55Q9BYV6 548 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 FGFR1OP2Q9NVK5 253 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 TSR3Q9UJK0 312 aaKnown RBP16.59■□□□□ 0.25
CHD4-210ENST00000544040 PALMO75781 387 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 GDF11O95390 407 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 EIF3BP55884 814 aaKnown RBP16.59■□□□□ 0.25
CHD4-210ENST00000544040 KRT33BQ14525 404 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 SNX19Q92543 992 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 PAGE5Q96GU1 130 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 AMNQ9BXJ7 453 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 COG4Q9H9E3 785 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 ZBTB12Q9Y330 459 aaPredicted RBP16.59■□□□□ 0.25
CHD4-210ENST00000544040 SNAP25P60880 206 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 FKBP3Q00688 224 aaKnown RBP16.59■□□□□ 0.25
CHD4-210ENST00000544040 SPARCL1Q14515 664 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 THAP9Q9H5L6 903 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 DCTN4Q9UJW0 460 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 FRA10AC1Q70Z53 315 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 GREM2Q9H772 168 aa16.59■□□□□ 0.25
CHD4-210ENST00000544040 ABCC4O15439 1325 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 SFI1A8K8P3 1242 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 RASA4BC9J798 803 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 RASA4O43374 803 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 PLCG1P19174 1290 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 APOA5Q6Q788 366 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 ANP32DO95626 131 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 ESRRBO95718 433 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 ATP1A3P13637 1013 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 PSMA2P25787 234 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 TBCCQ15814 346 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 EEPD1Q7L9B9 569 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 ATP6V0A1Q93050 837 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 TMEM60Q9H2L4 133 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 APOBEC2Q9Y235 224 aaKnown RBP16.58■□□□□ 0.25
CHD4-210ENST00000544040 ITM2BQ9Y287 266 aa16.58■□□□□ 0.25
CHD4-210ENST00000544040 LMNAP02545 664 aaKnown RBP16.58■□□□□ 0.24
CHD4-210ENST00000544040 HSPA6P17066 643 aa16.58■□□□□ 0.24
CHD4-210ENST00000544040 PCYT1AP49585 367 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms