RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 PAIP2BQ9ULR5 123 aaKnown RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 TEX33O43247 280 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 CEP104O60308 925 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 HNRNPCP07910 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDH4-201ENST00000543233 CALM1P0DP23 149 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 CALM2P0DP24 149 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 CALM3P0DP25 149 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 MFSD14BQ5SR56 506 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 SPTY2D1Q68D10 685 aaPredicted RBP12.3□□□□□ -0.44
CDH4-201ENST00000543233 TRAPPC11Q7Z392 1133 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 TEX9Q8N6V9 391 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 PAGE5Q96GU1 130 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 PANX2Q96RD6 677 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 PSMB7Q99436 277 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 UBA5Q9GZZ9 404 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 DDAH1O94760 285 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 BAG3O95817 575 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 CCND1P24385 295 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 CBX3Q13185 183 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 USP17L2Q6R6M4 530 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 POTEAQ6S8J7 498 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 ZNF804AQ7Z570 1209 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 KIFAP3Q92845 792 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 UBAP1Q9NZ09 502 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 PHF24Q9UPV7 400 aa12.3□□□□□ -0.44
CDH4-201ENST00000543233 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 SEMA3EO15041 775 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 TRIM37O94972 964 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 VIL1P09327 827 aaKnown RBP12.29□□□□□ -0.44
CDH4-201ENST00000543233 KCNJ2P63252 427 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 KIF2BQ8N4N8 673 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 ANKS4BQ8N8V4 417 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 WDR66Q8TBY9 1149 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 NAA15Q9BXJ9 866 aaKnown RBP12.29□□□□□ -0.44
CDH4-201ENST00000543233 VCXQ9H320 206 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 ATXN10Q9UBB4 475 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 GGT7Q9UJ14 662 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 CTNND2Q9UQB3 1225 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 ZNF510Q9Y2H8 683 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 HGSO14964 777 aaPredicted RBP12.29□□□□□ -0.44
CDH4-201ENST00000543233 SERPINB2P05120 415 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 GTF2IP78347 998 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 LACTBP83111 547 aaPredicted RBP12.29□□□□□ -0.44
CDH4-201ENST00000543233 ATP11AP98196 1134 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 PAK2Q13177 524 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 CCDC122Q5T0U0 273 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 RRAGBQ5VZM2 374 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 ANO7Q6IWH7 933 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 C16orf87Q6PH81 154 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 MKL1Q969V6 931 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 RPGRIP1Q96KN7 1286 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 ATP6V1G3Q96LB4 118 aa12.29□□□□□ -0.44
CDH4-201ENST00000543233 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
CDH4-201ENST00000543233 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDH4-201ENST00000543233 ORC4O43929 436 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 GFPT2O94808 682 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 NPTXRO95502 500 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 IDEP14735 1019 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 ALOX15P16050 662 aaPredicted RBP12.28□□□□□ -0.44
CDH4-201ENST00000543233 ALDH5A1P51649 535 aaPredicted RBP12.28□□□□□ -0.44
CDH4-201ENST00000543233 MORC3Q14149 939 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 RC3H1Q5TC82 1133 aaKnown RBP12.28□□□□□ -0.44
CDH4-201ENST00000543233 CCDC80Q76M96 950 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 FBF1Q8TES7 1133 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 CCT6BQ92526 530 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 NDST4Q9H3R1 872 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 CD209Q9NNX6 404 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 TBC1D7Q9P0N9 293 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 CHD4Q14839 1912 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 XDHP47989 1333 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 FAM237AA0A1B0GTK4 181 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 CETN3O15182 167 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 HIP1RO75146 1068 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 VAV2P52735 878 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 BPIFB4P59827 614 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 USP46P62068 366 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 IL17AQ16552 155 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 P3H1Q32P28 736 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 LACTB2Q53H82 288 aaPredicted RBP12.28□□□□□ -0.44
CDH4-201ENST00000543233 RASIP1Q5U651 963 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 ZNF365Q70YC5 407 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 NANOGNBQ7Z5D8 188 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 BLIDQ8IZY5 108 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 CCDC197Q8NCU1 140 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 TMEM47Q9BQJ4 181 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 CHMP2BQ9UQN3 213 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 ZNF233A6NK53 670 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 PDE2AO00408 941 aaPredicted RBP12.28□□□□□ -0.44
CDH4-201ENST00000543233 SERPINB4P48594 390 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 KLC1Q07866 573 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 PFKFB3Q16875 520 aaPredicted RBP12.28□□□□□ -0.44
CDH4-201ENST00000543233 MAP7D1Q3KQU3 841 aa12.28□□□□□ -0.44
CDH4-201ENST00000543233 FRMPD2Q68DX3 1309 aaPredicted RBP12.28□□□□□ -0.44
CDH4-201ENST00000543233 RGS17Q9UGC6 210 aaPredicted RBP12.28□□□□□ -0.44
CDH4-201ENST00000543233 TRPC5Q9UL62 973 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms