RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 WBP1LQ9NX94 342 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 NRBP1Q9UHY1 535 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 TSKSQ9UJT2 592 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 DNM3Q9UQ16 869 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 SYCE3A1L190 88 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 E9PMD0 336 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 BACH1O14867 736 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 NKRFO15226 690 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDB1-221ENST00000543162 FOXN1O15353 648 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 DKC1O60832 514 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDB1-221ENST00000543162 ATG7O95352 703 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 SSBP05455 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDB1-221ENST00000543162 SUPT20HL2P0C7V6 817 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 ZNF865P0CJ78 1059 aaPredicted RBP11.93□□□□□ -0.5
DDB1-221ENST00000543162 PSMC5P62195 406 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 MDM2Q00987 491 aaPredicted RBP11.93□□□□□ -0.5
DDB1-221ENST00000543162 AMPD3Q01432 767 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 TNFAIP2Q03169 654 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 ARHGAP1Q07960 439 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 PNOCQ13519 176 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 DHX8Q14562 1220 aaKnown RBP11.93□□□□□ -0.5
DDB1-221ENST00000543162 MCM6Q14566 821 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 DUSP28Q4G0W2 176 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 TMEM63BQ5T3F8 832 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 SWSAP1Q6NVH7 229 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 RBM43Q6ZSC3 357 aaKnown RBP11.93□□□□□ -0.5
DDB1-221ENST00000543162 SV2BQ7L1I2 683 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 SH3RF1Q7Z6J0 888 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 DNAJC5GQ8N7S2 189 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 RAET1EQ8TD07 263 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 LRRC15Q8TF66 581 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 SEPT1Q8WYJ6 367 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 TRIB2Q92519 343 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 STAMQ92783 540 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 COPS5Q92905 334 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 ATP6V0A1Q93050 837 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 SPATA33Q96N06 139 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 NACC1Q96RE7 527 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 KBTBD4Q9NVX7 518 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 GABBR1Q9UBS5 961 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 TELO2Q9Y4R8 837 aa11.93□□□□□ -0.5
DDB1-221ENST00000543162 A0A087WWV3 80 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.92□□□□□ -0.5
DDB1-221ENST00000543162 GSTTP1A0A1W2PQM5 241 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
DDB1-221ENST00000543162 ADCY3O60266 1144 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 SMC2O95347 1197 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 LYPLA2O95372 231 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 EYA4O95677 639 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 PLA2G4BP0C869 781 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 SMPD1P17405 629 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 PRMT2P55345 433 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 PSMC6P62333 389 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 UGCGQ16739 394 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 GJC2Q5T442 439 aaPredicted RBP11.92□□□□□ -0.5
DDB1-221ENST00000543162 FAM160B1Q5W0V3 765 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 C4orf19Q8IY42 314 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 PIGOQ8TEQ8 1089 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 ERCC4Q92889 916 aaPredicted RBP11.92□□□□□ -0.5
DDB1-221ENST00000543162 EMID1Q96A84 441 aaPredicted RBP11.92□□□□□ -0.5
DDB1-221ENST00000543162 GPR20Q99678 358 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 MTRQ99707 1265 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 LRRC27Q9C0I9 530 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 KIAA1468Q9P260 1216 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 WRAP73Q9P2S5 460 aaPredicted RBP11.92□□□□□ -0.5
DDB1-221ENST00000543162 FAM184BQ9ULE4 1060 aa11.92□□□□□ -0.5
DDB1-221ENST00000543162 MYL1P05976 194 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 ELNP15502 786 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 PTGS1P23219 599 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 TCF7P36402 384 aaPredicted RBP11.91□□□□□ -0.5
DDB1-221ENST00000543162 ZNF445P59923 1031 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 HSDL1Q3SXM5 330 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 SASS6Q6UVJ0 657 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 CCDC60Q8IWA6 550 aaPredicted RBP11.91□□□□□ -0.5
DDB1-221ENST00000543162 SYT2Q8N9I0 419 aaPredicted RBP11.91□□□□□ -0.5
DDB1-221ENST00000543162 OR6J1Q8NGC5 347 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 PPTC7Q8NI37 304 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 SMARCE1Q969G3 411 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 BLZF1Q9H2G9 400 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 BHMT2Q9H2M3 363 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 AZI2Q9H6S1 392 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 ZNF302Q9NR11 478 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 PCDHA5Q9Y5H7 936 aa11.91□□□□□ -0.5
DDB1-221ENST00000543162 IGSF9BQ9UPX0 1349 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 WDR81Q562E7 1941 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 IGKV6D-21A0A0A0MT36 114 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 ARHGEF35A5YM69 484 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 ZBTB39O15060 712 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 DYNC1LI2O43237 492 aaPredicted RBP11.9□□□□□ -0.5
DDB1-221ENST00000543162 HMGCRP04035 888 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 CCDC192P0DO97 292 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 XRCC6P12956 609 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDB1-221ENST00000543162 CYBAP13498 195 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 AKR1A1P14550 325 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 CASP1P29466 404 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 YWHABP31946 246 aaKnown RBP11.9□□□□□ -0.5
DDB1-221ENST00000543162 STAT5BP51692 787 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 SLC12A3P55017 1021 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 DPYDQ12882 1025 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms