RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 RBM15Q96T37 977 aaKnown RBP eCLIP5.06□□□□□ -1.6
LDHB-209ENST00000542765 FEZ1Q99689 392 aa5.06□□□□□ -1.6
LDHB-209ENST00000542765 NGRNQ9NPE2 291 aaKnown RBP5.06□□□□□ -1.6
LDHB-209ENST00000542765 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.06□□□□□ -1.6
LDHB-209ENST00000542765 NUB1Q9Y5A7 615 aa5.06□□□□□ -1.6
LDHB-209ENST00000542765 KCNK3O14649 394 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 NKX3-2P78367 333 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 TMEM177Q53S58 311 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 PLEKHG4Q58EX7 1191 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 FIGNQ5HY92 759 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 FAM26FQ5R3K3 315 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 FSTL4Q6MZW2 842 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 ZCCHC8Q6NZY4 707 aaKnown RBP5.05□□□□□ -1.6
LDHB-209ENST00000542765 TTLL7Q6ZT98 887 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 OVCH1Q7RTY7 1134 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 NINJ1Q92982 152 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
LDHB-209ENST00000542765 B4E1Z4 1266 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 GLRX3O76003 335 aaKnown RBP5.04□□□□□ -1.6
LDHB-209ENST00000542765 NPTXRO95502 500 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 ZNF28P17035 718 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 GYS2P54840 703 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 PAN2Q504Q3 1202 aaKnown RBP5.04□□□□□ -1.6
LDHB-209ENST00000542765 DALRD3Q5D0E6 543 aaKnown RBP5.04□□□□□ -1.6
LDHB-209ENST00000542765 HHIPL2Q6UWX4 724 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 STK32CQ86UX6 486 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 FERMT3Q86UX7 667 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 PROSER1Q86XN7 944 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 NIM1KQ8IY84 436 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 INTS7Q9NVH2 962 aaKnown RBP5.04□□□□□ -1.6
LDHB-209ENST00000542765 MAGEC2Q9UBF1 373 aaPredicted RBP5.04□□□□□ -1.6
LDHB-209ENST00000542765 RBPJLQ9UBG7 517 aa5.04□□□□□ -1.6
LDHB-209ENST00000542765 FAM83GA6ND36 823 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 FAM90A27PA6NNH2 459 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 M0R2C6 588 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 ACOT7O00154 380 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 ITGB3P05106 788 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 JMJD7P0C870 316 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 FAHP16930 419 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 PTPN1P18031 435 aaKnown RBP5.03□□□□□ -1.6
LDHB-209ENST00000542765 MECP2P51608 486 aaKnown RBP5.03□□□□□ -1.6
LDHB-209ENST00000542765 GJA9P57773 515 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 PIK3R6Q5UE93 754 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 BTBD8Q5XKL5 378 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 DDX53Q86TM3 631 aaKnown RBP5.03□□□□□ -1.6
LDHB-209ENST00000542765 NOSTRINQ8IVI9 506 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 DHX37Q8IY37 1157 aaKnown RBP5.03□□□□□ -1.6
LDHB-209ENST00000542765 NLGN4XQ8N0W4 816 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 TXNDC5Q8NBS9 432 aaKnown RBP5.03□□□□□ -1.6
LDHB-209ENST00000542765 MBD6Q96DN6 1003 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 BDH2Q9BUT1 245 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 SSBP3Q9BWW4 388 aaPredicted RBP5.03□□□□□ -1.6
LDHB-209ENST00000542765 USP40Q9NVE5 1235 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 SAMD15Q9P1V8 674 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 PLAAQ9Y263 795 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 ATP23Q9Y6H3 246 aa5.03□□□□□ -1.6
LDHB-209ENST00000542765 CNR2P34972 360 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 SEC23AQ15436 765 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 RGL3Q3MIN7 710 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 TM4SF20Q53R12 229 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 CD276Q5ZPR3 534 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 CPZQ66K79 652 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 TMC5Q6UXY8 1006 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 EP400NLQ6ZTU2 488 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 LRRTM3Q86VH5 581 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 DDX1Q92499 740 aaKnown RBP5.02□□□□□ -1.61
LDHB-209ENST00000542765 MFSD3Q96ES6 412 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 ZSWIM3Q96MP5 696 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 SLKQ9H2G2 1235 aaPredicted RBP5.02□□□□□ -1.61
LDHB-209ENST00000542765 RIC8BQ9NVN3 520 aa5.02□□□□□ -1.61
LDHB-209ENST00000542765 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.01□□□□□ -1.61
LDHB-209ENST00000542765 SLC12A8A0AV02 714 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 ANKRD62A6NC57 917 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 C9orf118A6NHY6 69 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 TRAF5O00463 557 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 SCDO00767 359 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 CLASP2O75122 1294 aaKnown RBP5.01□□□□□ -1.61
LDHB-209ENST00000542765 COL6A1P12109 1028 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 GJA4P35212 333 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 FLT3P36888 993 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 MLLT6P55198 1093 aaPredicted RBP5.01□□□□□ -1.61
LDHB-209ENST00000542765 PLP2Q04941 152 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 UBXN11Q5T124 520 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 ERICH6BQ5W0A0 696 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 CDCA2Q69YH5 1023 aaPredicted RBP5.01□□□□□ -1.61
LDHB-209ENST00000542765 VASNQ6EMK4 673 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 CNNM4Q6P4Q7 775 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 OTOP1Q7RTM1 612 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 PRRT2Q7Z6L0 340 aaPredicted RBP5.01□□□□□ -1.61
LDHB-209ENST00000542765 C2orf69Q8N8R5 385 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 CHST14Q8NCH0 376 aa5.01□□□□□ -1.61
LDHB-209ENST00000542765 YTHDC1Q96MU7 727 aaKnown RBP5.01□□□□□ -1.61
LDHB-209ENST00000542765 PRAMEF25A6NGN4 478 aa5□□□□□ -1.61
LDHB-209ENST00000542765 MROH6A6NGR9 719 aa5□□□□□ -1.61
LDHB-209ENST00000542765 CBX4O00257 560 aa5□□□□□ -1.61
LDHB-209ENST00000542765 DDX3XO00571 662 aaKnown RBP eCLIP5□□□□□ -1.61
LDHB-209ENST00000542765 KPNA6O60684 536 aa5□□□□□ -1.61
LDHB-209ENST00000542765 C4BPAP04003 597 aaKnown RBP5□□□□□ -1.61
LDHB-209ENST00000542765 ADRB1P08588 477 aa5□□□□□ -1.61
LDHB-209ENST00000542765 POU3F2P20265 443 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms