RNA–Protein interactions for RNA: ENST00000542488.5

TSG101-206, Transcript of tumor susceptibility 101, human

TSL 5

Gene TSG101, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSG101-206	ENST00000542488	LUC7L	Q9NQ29	371 aa	Known RBP	4.23	□□□□□ -1.73
TSG101-206	ENST00000542488	TDRD9	Q8NDG6	1382 aa	Known RBP	4.23	□□□□□ -1.73
TSG101-206	ENST00000542488	GRIN2A	Q12879	1464 aa		4.23	□□□□□ -1.73
TSG101-206	ENST00000542488	PRG4	Q92954	1404 aa	Predicted RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	CCDC66	A2RUB6	948 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	FFAR3	O14843	346 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	WNT9A	O14904	365 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	NKRF	O15226	690 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	FBXO21	O94952	628 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	NPTXR	O95502	500 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	PLA2G1B	P04054	148 aa	Known RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	ENO2	P09104	434 aa	Predicted RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	INHBB	P09529	407 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	PYGM	P11217	842 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	PDE6A	P16499	860 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	GJA4	P35212	333 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	SLURP1	P55000	103 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	ITGA1	P56199	1179 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	GJA9	P57773	515 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	RBM6	P78332	1123 aa	Known RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	KIAA2012	Q0VF49	1180 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	CR1L	Q2VPA4	569 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	PAN2	Q504Q3	1202 aa	Known RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	FNDC3B	Q53EP0	1204 aa	Known RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	TRIM61	Q5EBN2	209 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	TAF7L	Q5H9L4	462 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	BTBD8	Q5XKL5	378 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	LIPI	Q6XZB0	460 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	SPOCD1	Q6ZMY3	1216 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	DDX53	Q86TM3	631 aa	Known RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	OSTM1	Q86WC4	334 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	HOMER1	Q86YM7	354 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	KRTAP1-3	Q8IUG1	177 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	CARF	Q8N187	725 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	WDR48	Q8TAF3	677 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	ZNF526	Q8TF50	670 aa	Predicted RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	NOX5	Q96PH1	765 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	L2HGDH	Q9H9P8	463 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	NCOA5	Q9HCD5	579 aa	Known RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	RIC8B	Q9NVN3	520 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	CROT	Q9UKG9	612 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	ATP23	Q9Y6H3	246 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	SCAF11	Q99590	1463 aa	Known RBP	4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	BAHCC1	Q9P281	2608 aa		4.22	□□□□□ -1.73
TSG101-206	ENST00000542488	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	TRIM13	O60858	407 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	LRG1	P02750	347 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	CYP1A1	P04798	512 aa	Predicted RBP	4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	FAH	P16930	419 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	RPL13	P26373	211 aa	Known RBP	4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	THBS2	P35442	1172 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	EPHA5	P54756	1037 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	TCEA2	Q15560	299 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	FIGN	Q5HY92	759 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	HABP4	Q5JVS0	413 aa	Known RBP	4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	TMC5	Q6UXY8	1006 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	UBE2R2	Q712K3	238 aa	Predicted RBP	4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	BRAP	Q7Z569	592 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	STK32C	Q86UX6	486 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	RBM12B	Q8IXT5	1001 aa	Known RBP	4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	GSTCD	Q8NEC7	633 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	CLEC4D	Q8WXI8	215 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	APPBP2	Q92624	585 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	HSPBP1	Q9NZL4	362 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	ARHGAP28	Q9P2N2	729 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	SRPK3	Q9UPE1	567 aa		4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	BLM	P54132	1417 aa	Predicted RBP	4.21	□□□□□ -1.74
TSG101-206	ENST00000542488	KCNQ2	O43526	872 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	OPA1	O60313	960 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	HIP1R	O75146	1068 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	RASGRP1	O95267	797 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	RAPGEF3	O95398	923 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	PLA2G5	P39877	138 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	VWA3B	Q502W6	1294 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	BORA	Q6PGQ7	559 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	NOP9	Q86U38	636 aa	Known RBP	4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	PTRH1	Q86Y79	214 aa	Known RBP	4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	ADGRG2	Q8IZP9	1017 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	C2orf69	Q8N8R5	385 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	SLC7A14	Q8TBB6	771 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	KCNC2	Q96PR1	638 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	SPATA25	Q9BR10	227 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	CELF4	Q9BZC1	486 aa	Known RBP	4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	CD244	Q9BZW8	370 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	DLL4	Q9NR61	685 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	FTSJ1	Q9UET6	329 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	RAPGEFL1	Q9UHV5	662 aa		4.2	□□□□□ -1.74
TSG101-206	ENST00000542488	RNF17	Q9BXT8	1623 aa	Known RBP	4.2	□□□□□ -1.74
TSG101-206	ENST00000542488		A0A1B0GTL3	188 aa		4.19	□□□□□ -1.74
TSG101-206	ENST00000542488	TCRBV16S1A1N1	A0A5B0	115 aa		4.19	□□□□□ -1.74
TSG101-206	ENST00000542488	DDX3X	O00571	662 aa	Known RBP eCLIP	4.19	□□□□□ -1.74	1e-12	■■■■■ 50.1
TSG101-206	ENST00000542488	ASMTL	O95671	621 aa		4.19	□□□□□ -1.74
TSG101-206	ENST00000542488	LTF	P02788	710 aa		4.19	□□□□□ -1.74
TSG101-206	ENST00000542488	ASL	P04424	464 aa		4.19	□□□□□ -1.74
TSG101-206	ENST00000542488	CKM	P06732	381 aa		4.19	□□□□□ -1.74
TSG101-206	ENST00000542488	PTPN1	P18031	435 aa	Known RBP	4.19	□□□□□ -1.74
TSG101-206	ENST00000542488	IGFALS	P35858	605 aa		4.19	□□□□□ -1.74
TSG101-206	ENST00000542488	CTSW	P56202	376 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms