RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 SEMA3FQ13275 785 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 CBX2Q14781 532 aaPredicted RBP10.29□□□□□ -0.76
UBC-211ENST00000542416 WTAPQ15007 396 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 RALYLQ86SE5 291 aaKnown RBP10.29□□□□□ -0.76
UBC-211ENST00000542416 CHD1LQ86WJ1 897 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 PLEKHM2Q8IWE5 1019 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 SMC5Q8IY18 1101 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 SPPL3Q8TCT6 385 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 RRP36Q96EU6 259 aaKnown RBP10.29□□□□□ -0.76
UBC-211ENST00000542416 SNX27Q96L92 541 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 MAP3K14Q99558 947 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 CDCA3Q99618 268 aaPredicted RBP10.29□□□□□ -0.76
UBC-211ENST00000542416 LZTS2Q9BRK4 669 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 PHF7Q9BWX1 381 aaPredicted RBP10.29□□□□□ -0.76
UBC-211ENST00000542416 AZI2Q9H6S1 392 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 ALG13Q9NP73 1137 aaKnown RBP10.29□□□□□ -0.76
UBC-211ENST00000542416 AAASQ9NRG9 546 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 SEC63Q9UGP8 760 aaKnown RBP10.29□□□□□ -0.76
UBC-211ENST00000542416 CDY2AQ9Y6F7 541 aa10.29□□□□□ -0.76
UBC-211ENST00000542416 MICAL3Q7RTP6 2002 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 LOC730098B7Z3J9 87 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 CYTH3O43739 400 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 ITGB1P05556 798 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 SRGAP2BP0DMP2 458 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 ATF7P17544 494 aaPredicted RBP10.28□□□□□ -0.76
UBC-211ENST00000542416 SIGLEC14Q08ET2 396 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 TROAPQ12815 778 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 CAMK1Q14012 370 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 ODR4Q5SWX8 454 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 PDE12Q6L8Q7 609 aaKnown RBP10.28□□□□□ -0.76
UBC-211ENST00000542416 RUFY4Q6ZNE9 571 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 NME8Q8N427 588 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 FBXL6Q8N531 539 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 KLHL23Q8NBE8 558 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 MICAL1Q8TDZ2 1067 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 POF1BQ8WVV4 589 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 DNAJB3Q8WWF6 145 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 RUFY2Q8WXA3 655 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 LRFN2Q9ULH4 789 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 PCDHB12Q9Y5F1 795 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 MRPL42Q9Y6G3 142 aaKnown RBP10.28□□□□□ -0.76
UBC-211ENST00000542416 PTPRSQ13332 1948 aa10.28□□□□□ -0.76
UBC-211ENST00000542416 MYO7AQ13402 2215 aa10.27□□□□□ -0.76
UBC-211ENST00000542416 LINC01565O15544 149 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 SCG2P13521 617 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 CD52P31358 61 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 GTF2F1P35269 517 aaKnown RBP eCLIP10.27□□□□□ -0.779e-7■■□□□ 13.9
UBC-211ENST00000542416 NRIP1P48552 1158 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 GNAQP50148 359 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 NUCB1Q02818 461 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 PAK2Q13177 524 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 MTMR1Q13613 665 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 SLC35G1Q2M3R5 365 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 CYB5R4Q7L1T6 521 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 TEX2Q8IWB9 1127 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 CRIPAKQ8N1N5 446 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 NCOA7Q8NI08 942 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 CTCFLQ8NI51 663 aaPredicted RBP10.27□□□□□ -0.77
UBC-211ENST00000542416 SPZ1Q9BXG8 430 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 TLE6Q9H808 572 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 CLEC1BQ9P126 229 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 USP15Q9Y4E8 981 aaPredicted RBP10.27□□□□□ -0.77
UBC-211ENST00000542416 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.77
UBC-211ENST00000542416 GSTTP1A0A1W2PQM5 241 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 SPDYE3A6NKU9 549 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 MEIS2O14770 477 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 CSPG5O95196 566 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 INSRRP14616 1297 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 KCNA2P16389 499 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 MARK3P27448 753 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 SLC26A2P50443 739 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 FOXK2Q01167 660 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 MARCH8Q5T0T0 291 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 B4GALNT3Q6L9W6 998 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 USP17L6PQ6QN14 398 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 TMTC2Q8N394 836 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 PRSS33Q8NF86 280 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 NEK1Q96PY6 1258 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 MTA3Q9BTC8 594 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 FAM49AQ9H0Q0 323 aaPredicted RBP10.26□□□□□ -0.77
UBC-211ENST00000542416 PSTPIP2Q9H939 334 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 AGO3Q9H9G7 860 aaKnown RBP10.26□□□□□ -0.77
UBC-211ENST00000542416 TLR9Q9NR96 1032 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 C1orf112Q9NSG2 853 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 PADI3Q9ULW8 664 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 PCDHB7Q9Y5E2 793 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 PCDHA2Q9Y5H9 948 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 IGSF9BQ9UPX0 1349 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 KDM3AQ9Y4C1 1321 aa10.26□□□□□ -0.77
UBC-211ENST00000542416 ZNF318Q5VUA4 2279 aa10.25□□□□□ -0.77
UBC-211ENST00000542416 SMIM35A0A1B0GVV1 85 aa10.25□□□□□ -0.77
UBC-211ENST00000542416 ATP9AO75110 1047 aa10.25□□□□□ -0.77
UBC-211ENST00000542416 DDAH1O94760 285 aa10.25□□□□□ -0.77
UBC-211ENST00000542416 DNAJB1P25685 340 aa10.25□□□□□ -0.77
UBC-211ENST00000542416 SARSP49591 514 aaKnown RBP10.25□□□□□ -0.77
UBC-211ENST00000542416 IGBP1P78318 339 aa10.25□□□□□ -0.77
UBC-211ENST00000542416 SPOUT1Q5T280 376 aaKnown RBP10.25□□□□□ -0.77
UBC-211ENST00000542416 IER5LQ5T953 404 aa10.25□□□□□ -0.77
UBC-211ENST00000542416 PLPPR4Q7Z2D5 763 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms