RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PSMD10O75832 226 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 CKBP12277 381 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 KRT2P35908 639 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 STAT5BP51692 787 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 SETQ01105 290 aaPredicted RBP11.03□□□□□ -0.64
YBX3-212ENST00000542002 PTK7Q13308 1070 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 MBTPS1Q14703 1052 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 PLCB4Q15147 1175 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 ZNF618Q5T7W0 954 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 RASIP1Q5U651 963 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 FAM109BQ6ICB4 259 aaPredicted RBP11.03□□□□□ -0.64
YBX3-212ENST00000542002 RUFY4Q6ZNE9 571 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 PLPPR4Q7Z2D5 763 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 CCDC60Q8IWA6 550 aaPredicted RBP11.03□□□□□ -0.64
YBX3-212ENST00000542002 DIS3L2Q8IYB7 885 aaKnown RBP11.03□□□□□ -0.64
YBX3-212ENST00000542002 FBXO18Q8NFZ0 1043 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 HAS1Q92839 578 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 ATP6V0A1Q93050 837 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 UNC45AQ9H3U1 944 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 IL23AQ9NPF7 189 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 ERAP1Q9NZ08 941 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 CXXC1Q9P0U4 656 aaPredicted RBP11.03□□□□□ -0.64
YBX3-212ENST00000542002 DDX25Q9UHL0 483 aaKnown RBP11.03□□□□□ -0.64
YBX3-212ENST00000542002 NOD1Q9Y239 953 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 DOCK5Q9H7D0 1870 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 EMSYQ7Z589 1322 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 ZBTB42B2RXF5 422 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 CCNT1O60563 726 aaKnown RBP11.02□□□□□ -0.65
YBX3-212ENST00000542002 NBNO60934 754 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 INSRRP14616 1297 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 RBL2Q08999 1139 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 PPIGQ13427 754 aaKnown RBP eCLIP11.02□□□□□ -0.653e-7■■□□□ 13.1
YBX3-212ENST00000542002 PPP4R3AQ6IN85 833 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 ZNF746Q6NUN9 644 aaPredicted RBP11.02□□□□□ -0.65
YBX3-212ENST00000542002 MOXD1Q6UVY6 613 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 OTOP2Q7RTS6 562 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 DEFB128Q7Z7B8 93 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 NEK8Q86SG6 692 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 C8orf76Q96K31 380 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 RIT2Q99578 217 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 KCNMB3Q9NPA1 279 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
YBX3-212ENST00000542002 MAFBQ9Y5Q3 323 aaPredicted RBP11.02□□□□□ -0.65
YBX3-212ENST00000542002 NRCAMQ92823 1304 aa11.02□□□□□ -0.65
YBX3-212ENST00000542002 MBLAC1A4D2B0 266 aaPredicted RBP11.01□□□□□ -0.65
YBX3-212ENST00000542002 GRXCR1A8MXD5 290 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 KIF28PB7ZC32 967 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 EML1O00423 815 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 ZNF862O60290 1169 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 STBD1O95210 358 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 FGBP02675 491 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 SELPP16109 830 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 THPOP40225 353 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 IGBP1P78318 339 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 PPFIA1Q13136 1202 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 BFSP2Q13515 415 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 GRIK4Q16099 956 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 UGCGQ16739 394 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 LRCH2Q5VUJ6 765 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 MIS18BP1Q6P0N0 1132 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 RETREG2Q8NC44 543 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 CAGE1Q8TC20 777 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 AFAP1L1Q8TED9 768 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 HERVK_113Q902F9 699 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 RNPC3Q96LT9 517 aaKnown RBP11.01□□□□□ -0.65
YBX3-212ENST00000542002 AZI2Q9H6S1 392 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 ZNF302Q9NR11 478 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 DISC1Q9NRI5 854 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 VAV3Q9UKW4 847 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 PCDHA10Q9Y5I2 948 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 TRIOBPQ9H2D6 2365 aa11.01□□□□□ -0.65
YBX3-212ENST00000542002 POTEB3A0JP26 581 aa11□□□□□ -0.65
YBX3-212ENST00000542002 HAX1O00165 279 aa11□□□□□ -0.65
YBX3-212ENST00000542002 BACH1O14867 736 aa11□□□□□ -0.65
YBX3-212ENST00000542002 CHMP2AO43633 222 aa11□□□□□ -0.65
YBX3-212ENST00000542002 GAS7O60861 476 aa11□□□□□ -0.65
YBX3-212ENST00000542002 CHRNA1P02708 482 aa11□□□□□ -0.65
YBX3-212ENST00000542002 HMGN5P82970 282 aaKnown RBP11□□□□□ -0.65
YBX3-212ENST00000542002 KRT76Q01546 638 aa11□□□□□ -0.65
YBX3-212ENST00000542002 TRIM29Q14134 588 aa11□□□□□ -0.65
YBX3-212ENST00000542002 PDXDC2PQ6P474 469 aa11□□□□□ -0.65
YBX3-212ENST00000542002 POTEBQ6S5H4 581 aa11□□□□□ -0.65
YBX3-212ENST00000542002 LRRC8DQ7L1W4 858 aa11□□□□□ -0.65
YBX3-212ENST00000542002 TRMT1LQ7Z2T5 733 aaKnown RBP11□□□□□ -0.65
YBX3-212ENST00000542002 SMAP1Q8IYB5 467 aaPredicted RBP11□□□□□ -0.65
YBX3-212ENST00000542002 GABBR1Q9UBS5 961 aa11□□□□□ -0.65
YBX3-212ENST00000542002 RSPH10B2B2RC85 870 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 CXCL10P02778 98 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 PSAPP07602 524 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 RSPH10BP0C881 870 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 GNAT1P11488 350 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 ATP2B1P20020 1258 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 GJB2P29033 226 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 MCM2P49736 904 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 TOB1P50616 345 aaPredicted RBP10.99□□□□□ -0.65
YBX3-212ENST00000542002 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 Q7L0L9 218 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 RPUSD2Q8IZ73 545 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms