RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 ZDHHC9Q9Y397 364 aa7.06□□□□□ -1.28
CIT-211ENST00000541841 LOC102724159A0A0B4J2E5 919 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 TCRBV5S4A2TA0A5A2 114 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 PDPK1O15530 556 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 TPD52L2O43399 206 aaKnown RBP7.05□□□□□ -1.28
CIT-211ENST00000541841 ADCY3O60266 1144 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 FAHP16930 419 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 SPIRE1Q08AE8 756 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 PWP2Q15269 919 aaKnown RBP7.05□□□□□ -1.28
CIT-211ENST00000541841 SKIDA1Q1XH10 827 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 ZXDCQ2QGD7 858 aaPredicted RBP7.05□□□□□ -1.28
CIT-211ENST00000541841 TKFCQ3LXA3 575 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 MTERF2Q49AM1 385 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 HSP90AB2PQ58FF8 381 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 FAM209AQ5JX71 171 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 KIAA0907Q7Z7F0 614 aaPredicted RBP7.05□□□□□ -1.28
CIT-211ENST00000541841 HOMER1Q86YM7 354 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 TRIM48Q8IWZ4 208 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 DTX3Q8N9I9 347 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 TTLL11Q8NHH1 800 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.05□□□□□ -1.28
CIT-211ENST00000541841 IGDCC4Q8TDY8 1250 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 CCDC113Q9H0I3 377 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 PPP4R1LQ9P1A2 415 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 FTSJ1Q9UET6 329 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 DSEQ9UL01 958 aa7.05□□□□□ -1.28
CIT-211ENST00000541841 TTBK1Q5TCY1 1321 aaPredicted RBP7.04□□□□□ -1.28
CIT-211ENST00000541841 PLEKHD1A6NEE1 506 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 C9orf118A6NHY6 69 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 LAMTOR5O43504 91 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 HABP4Q5JVS0 413 aaKnown RBP7.04□□□□□ -1.28
CIT-211ENST00000541841 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.04□□□□□ -1.28
CIT-211ENST00000541841 KBTBD2Q8IY47 623 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 SH3RF2Q8TEC5 729 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 ZFYVE21Q9BQ24 234 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 DLL4Q9NR61 685 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 GABBR1Q9UBS5 961 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 ZFP69BQ9UJL9 534 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 CNOT11Q9UKZ1 510 aaKnown RBP7.04□□□□□ -1.28
CIT-211ENST00000541841 PCDHA8Q9Y5H6 950 aa7.04□□□□□ -1.28
CIT-211ENST00000541841 ACOT7O00154 380 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 B4GALT4O60513 344 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 PEX14O75381 377 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 PDGFRBP09619 1106 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 MASP1P48740 699 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 PFKPQ01813 784 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 SSRP1Q08945 709 aaKnown RBP7.03□□□□□ -1.28
CIT-211ENST00000541841 CD276Q5ZPR3 534 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 GLB1LQ6UWU2 654 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 KCTD1Q719H9 257 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 GPR155Q7Z3F1 870 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 STPG3Q8N7X2 389 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 JDP2Q8WYK2 163 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 PSMD1Q99460 953 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 CDC6Q99741 560 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 SLC39A2Q9NP94 309 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 TMEM260Q9NX78 707 aa7.03□□□□□ -1.28
CIT-211ENST00000541841 FAM47E-STBD1D6RA91 191 aa7.02□□□□□ -1.29
CIT-211ENST00000541841 NFATC3Q12968 1075 aa7.02□□□□□ -1.29
CIT-211ENST00000541841 ICAM4Q14773 271 aa7.02□□□□□ -1.29
CIT-211ENST00000541841 PKN3Q6P5Z2 889 aa7.02□□□□□ -1.29
CIT-211ENST00000541841 MTDHQ86UE4 582 aaKnown RBP7.02□□□□□ -1.29
CIT-211ENST00000541841 FMNL3Q8IVF7 1028 aa7.02□□□□□ -1.29
CIT-211ENST00000541841 EXOC2Q96KP1 924 aa7.02□□□□□ -1.29
CIT-211ENST00000541841 ALG1Q9BT22 464 aa7.02□□□□□ -1.29
CIT-211ENST00000541841 HSPBP1Q9NZL4 362 aa7.02□□□□□ -1.29
CIT-211ENST00000541841 TRBV23-1A0A0A0MS06 115 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.01□□□□□ -1.29
CIT-211ENST00000541841 CCDC194A0A1B0GVG4 234 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 KCNK3O14649 394 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 CYP7B1O75881 506 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 KLHL18O94889 574 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 IL18BPO95998 194 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 C6orf222P0C671 652 aaPredicted RBP7.01□□□□□ -1.29
CIT-211ENST00000541841 FAM153BP0C7A2 387 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 SRGAP2CP0DJJ0 459 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 ZNF20P17024 532 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 RASGRF1Q13972 1273 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 C16orf86Q6ZW13 317 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 CHST13Q8NET6 341 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 SAMD11Q96NU1 681 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 WRNIP1Q96S55 665 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 TACO1Q9BSH4 297 aaKnown RBP7.01□□□□□ -1.29
CIT-211ENST00000541841 JADE2Q9NQC1 790 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 ARHGAP20Q9P2F6 1191 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 PTPN22Q9Y2R2 807 aa7.01□□□□□ -1.29
CIT-211ENST00000541841 GPR42O15529 346 aa7□□□□□ -1.29
CIT-211ENST00000541841 FBXO21O94952 628 aa7□□□□□ -1.29
CIT-211ENST00000541841 PYGMP11217 842 aa7□□□□□ -1.29
CIT-211ENST00000541841 KRT15P19012 456 aa7□□□□□ -1.29
CIT-211ENST00000541841 EVA1CP58658 441 aa7□□□□□ -1.29
CIT-211ENST00000541841 SMAD2Q15796 467 aaKnown RBP7□□□□□ -1.29
CIT-211ENST00000541841 EXOC8Q8IYI6 725 aa7□□□□□ -1.29
CIT-211ENST00000541841 FAM9AQ8IZU1 332 aaPredicted RBP7□□□□□ -1.29
CIT-211ENST00000541841 KLHL36Q8N4N3 616 aa7□□□□□ -1.29
CIT-211ENST00000541841 FEZ1Q99689 392 aa7□□□□□ -1.29
CIT-211ENST00000541841 BARX1Q9HBU1 254 aaPredicted RBP7□□□□□ -1.29
CIT-211ENST00000541841 NPEPPSL1A6NEC2 478 aa6.99□□□□□ -1.29
CIT-211ENST00000541841 FAM90A27PA6NNH2 459 aa6.99□□□□□ -1.29
CIT-211ENST00000541841 ZNF839A8K0R7 811 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms