RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	KRT14	P02533	472 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FECH	P22830	423 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RNASE9	P60153	205 aa	Known RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	APBA1	Q02410	837 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TTMP	Q5BVD1	217 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FAM83B	Q5T0W9	1011 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PAPD7	Q5XG87	772 aa	Known RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	KRT25	Q7Z3Z0	450 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CCDC91	Q7Z6B0	441 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SUGP1	Q8IWZ8	645 aa	Known RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SLC44A5	Q8NCS7	719 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TMEM47	Q9BQJ4	181 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CXorf56	Q9H5V9	222 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	LRWD1	Q9UFC0	647 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ITIH6	Q6UXX5	1313 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	BAZ2B	Q9UIF8	2168 aa	Known RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PDHX	O00330	501 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TRIM21	P19474	475 aa	Known RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RGS2	P41220	211 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NFRKB	Q6P4R8	1299 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PIK3AP1	Q6ZUJ8	805 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FAM212A	Q96EL1	285 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RUFY1	Q96T51	708 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CD248	Q9HCU0	757 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	DDX4	Q9NQI0	724 aa	Known RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RWDD2A	Q9UIY3	292 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GRIN2D	O15399	1336 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	LRRC10B	A6NIK2	292 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PP2D1	A8MPX8	630 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	KRT86	O43790	486 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	STRN	O43815	780 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SHOX2	O60902	331 aa	Predicted RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	USP2	O75604	605 aa	Predicted RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	IPO7	O95373	1038 aa	Known RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MOCS3	O95396	460 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NDUFB10	O96000	172 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MCM3	P25205	808 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	KRT2	P35908	639 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SEC24C	P53992	1094 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GUCY1A3	Q02108	690 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CKAP4	Q07065	602 aa	Known RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CT47A1	Q5JQC4	288 aa	Predicted RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TTC38	Q5R3I4	469 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CYP4F22	Q6NT55	531 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	OTUD6B	Q8N6M0	293 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	IFT81	Q8WYA0	676 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TRIM47	Q96LD4	638 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MMP19	Q99542	508 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FAM184B	Q9ULE4	1060 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SLC45A1	Q9Y2W3	748 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	STK36	Q9NRP7	1315 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	KIF3C	O14782	793 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TRPA1	O75762	1119 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CFB	P00751	764 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RPN1	P04843	607 aa	Known RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SMARCA1	P28370	1054 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GUCY2F	P51841	1108 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SP3	Q02447	781 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SF3A3	Q12874	501 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GRIK5	Q16478	980 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PKN1	Q16512	942 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	IL17A	Q16552	155 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ARHGEF16	Q5VV41	709 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PPP1R18	Q6NYC8	613 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TNS4	Q8IZW8	715 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GMCL1P1	Q8NEA9	526 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	AEN	Q8WTP8	325 aa	Known RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GMCL1	Q96IK5	515 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	BMP2K	Q9NSY1	1161 aa	Predicted RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PCDHA1	Q9Y5I3	950 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CAPN6	Q9Y6Q1	641 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PFAS	O15067	1338 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PNMA6F	A0A0J9YX94	578 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ECM2	O94769	699 aa	Predicted RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CNGA1	P29973	690 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	HIRA	P54198	1017 aa	Predicted RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	OAZ1	P54368	228 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SNRNP48	Q6IEG0	339 aa	Known RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PLEKHH3	Q7Z736	793 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MS4A14	Q96JA4	679 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MAF1	Q9H063	256 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	HOMER2	Q9NSB8	354 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RNF146	Q9NTX7	359 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FRMPD2	Q68DX3	1309 aa	Predicted RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CASZ1	Q86V15	1759 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	COL2A1	P02458	1487 aa	Predicted RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TARSL2	A2RTX5	802 aa	Known RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	BACH1	O14867	736 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZNF263	O14978	683 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	KIAA0754	O94854	1291 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SSB	P05455	408 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SLC10A3	P09131	477 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SHMT1	P34896	483 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	KRT83	P78385	493 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SPAG1	Q07617	926 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TBC1D8B	Q0IIM8	1120 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	KIF5A	Q12840	1032 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms