RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PRDM12Q9H4Q4 367 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 CEP131Q9UPN4 1083 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 TRPC6Q9Y210 931 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 SQORQ9Y6N5 450 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 SCN5AQ14524 2016 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 A0A0C4DFX4 3053 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 IPO5O00410 1097 aaKnown RBP11.8□□□□□ -0.52
CDCA3-208ENST00000540683 TREHO43280 583 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 NBNO60934 754 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 GJB5O95377 273 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 CA3P07451 260 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 POU3F3P20264 500 aaPredicted RBP11.8□□□□□ -0.52
CDCA3-208ENST00000540683 CDC27P30260 824 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 USP11P51784 963 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 ACTR2P61160 394 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 KRT76Q01546 638 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 GRIK4Q16099 956 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 PLEKHG4Q58EX7 1191 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 ZNF746Q6NUN9 644 aaPredicted RBP11.8□□□□□ -0.52
CDCA3-208ENST00000540683 PLA2G4DQ86XP0 818 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 ATXN2LQ8WWM7 1075 aaKnown RBP11.8□□□□□ -0.52
CDCA3-208ENST00000540683 FAM167AQ96KS9 214 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 NAP1L4Q99733 375 aaKnown RBP11.8□□□□□ -0.52
CDCA3-208ENST00000540683 ZNF577Q9BSK1 485 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 SLC26A6Q9BXS9 759 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 FTHL17Q9BXU8 183 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 AGO4Q9HCK5 861 aaKnown RBP11.8□□□□□ -0.52
CDCA3-208ENST00000540683 SETD4Q9NVD3 440 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 RWDD3Q9Y3V2 267 aa11.8□□□□□ -0.52
CDCA3-208ENST00000540683 COL1A2P08123 1366 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 MYO9BQ13459 2157 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 GBF1Q92538 1859 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 GSTTP1A0A1W2PQM5 241 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 POTEB3A0JP26 581 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 MBLAC1A4D2B0 266 aaPredicted RBP11.79□□□□□ -0.52
CDCA3-208ENST00000540683 BACH1O14867 736 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 HBP1O60381 514 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 ATP9AO75110 1047 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 PSAPP07602 524 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 PDIA3P30101 505 aaKnown RBP11.79□□□□□ -0.52
CDCA3-208ENST00000540683 RABGGTBP53611 331 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 NLRP5P59047 1200 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 ZNF484Q5JVG2 852 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 POTEBQ6S5H4 581 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
CDCA3-208ENST00000540683 TGS1Q96RS0 853 aaKnown RBP11.79□□□□□ -0.52
CDCA3-208ENST00000540683 IFIH1Q9BYX4 1025 aaKnown RBP11.79□□□□□ -0.52
CDCA3-208ENST00000540683 FAM217BQ9NTX9 383 aaPredicted RBP11.79□□□□□ -0.52
CDCA3-208ENST00000540683 PDRG1Q9NUG6 133 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 THEGQ9P2T0 379 aa11.79□□□□□ -0.52
CDCA3-208ENST00000540683 YBX2Q9Y2T7 364 aaKnown RBP11.79□□□□□ -0.52
CDCA3-208ENST00000540683 ATG7O95352 703 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 SFNP31947 248 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 ADAM17P78536 824 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 ZNF200P98182 395 aaPredicted RBP11.78□□□□□ -0.52
CDCA3-208ENST00000540683 PTPROQ16827 1216 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 TJAP1Q5JTD0 557 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 JAKMIP3Q5VZ66 844 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 SKAP1Q86WV1 359 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 TRIM50Q86XT4 487 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 DBF4BQ8NFT6 615 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 RDM1Q8NG50 284 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 PPP1R13LQ8WUF5 828 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 BRMS1Q9HCU9 246 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 COG5Q9UP83 839 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 SAMM50Q9Y512 469 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 PCDHA2Q9Y5H9 948 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 PCDHA10Q9Y5I2 948 aa11.78□□□□□ -0.52
CDCA3-208ENST00000540683 DOCK5Q9H7D0 1870 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 SMIM35A0A1B0GVV1 85 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 WDR64B1ANS9 1081 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 DKC1O60832 514 aaKnown RBP eCLIP11.77□□□□□ -0.53
CDCA3-208ENST00000540683 MARK3P27448 753 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 TMOD1P28289 359 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 CIITAP33076 1130 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 MRPS5P82675 430 aaKnown RBP11.77□□□□□ -0.53
CDCA3-208ENST00000540683 MRPS6P82932 125 aaKnown RBP11.77□□□□□ -0.53
CDCA3-208ENST00000540683 CDC42EP1Q00587 391 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 TAP1Q03518 808 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 PDXDC2PQ6P474 469 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 TSHZ1Q6ZSZ6 1077 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 CKAP2LQ8IYA6 745 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 MYOCDQ8IZQ8 938 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 ARNTL2Q8WYA1 636 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 VWCEQ96DN2 955 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 YME1L1Q96TA2 773 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 RIT2Q99578 217 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
CDCA3-208ENST00000540683 ZNF302Q9NR11 478 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 PCDHA4Q9UN74 947 aa11.77□□□□□ -0.53
CDCA3-208ENST00000540683 CHD9Q3L8U1 2897 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 CUL9Q8IWT3 2517 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 IGKV6D-21A0A0A0MT36 114 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 MAGEB2O15479 319 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 GAS7O60861 476 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 CTSHP09668 335 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 STAG3L1P0CL83 205 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 INSRRP14616 1297 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms