RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 SUGCTQ9HAC7 445 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 POTEFA5A3E0 1075 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 IPO5O00410 1097 aaKnown RBP9.4□□□□□ -0.9
YBX3-208ENST00000540447 NFIBO00712 420 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 KITP10721 976 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 TNIP2Q8NFZ5 429 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 PAIP1Q9H074 479 aaKnown RBP9.4□□□□□ -0.9
YBX3-208ENST00000540447 ADNPQ9H2P0 1102 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 RABGEF1Q9UJ41 708 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 C16orf96A6NNT2 1141 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 MYBL2P10244 700 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 NDUFA5Q16718 116 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 CWF19L1Q69YN2 538 aaKnown RBP9.4□□□□□ -0.9
YBX3-208ENST00000540447 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 UBE3BQ7Z3V4 1068 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 LUZP2Q86TE4 346 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 TMOD4Q9NZQ9 345 aa9.4□□□□□ -0.9
YBX3-208ENST00000540447 CORO1CQ9ULV4 474 aaPredicted RBP9.4□□□□□ -0.9
YBX3-208ENST00000540447 ASXL1Q8IXJ9 1541 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 SGK1O00141 431 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 TSC22D2O75157 780 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 FSBPO95073 299 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 MFN2O95140 757 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 ENO1P06733 434 aaKnown RBP9.4□□□□□ -0.91
YBX3-208ENST00000540447 C10orf76Q5T2E6 689 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 TMEM110Q86TL2 294 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 FBXL13Q8NEE6 735 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 HAUS7Q99871 368 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 LRRC1Q9BTT6 524 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 C6orf203Q9P0P8 240 aaPredicted RBP9.4□□□□□ -0.91
YBX3-208ENST00000540447 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.4□□□□□ -0.91
YBX3-208ENST00000540447 MAPKBP1O60336 1514 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 USP19O94966 1318 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 NSD2O96028 1365 aa9.4□□□□□ -0.91
YBX3-208ENST00000540447 TOP2AP11388 1531 aaKnown RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 GRID2IPA4D2P6 1211 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 CCNT1O60563 726 aaKnown RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 RAPGEF3O95398 923 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 AGTP01019 485 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 HLA-DPA1P20036 260 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 SAT1P21673 171 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 CDC25CP30307 473 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 CBX3Q13185 183 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 ITIH4Q14624 930 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 NLRP9Q7RTR0 991 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 SUN5Q8TC36 379 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 MTBPQ96DY7 904 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 NOL6Q9H6R4 1146 aaKnown RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 ARMCX3Q9UH62 379 aaPredicted RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 DSEQ9UL01 958 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 TIAM1Q13009 1591 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 PPP6R2O75170 966 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 NYAP1Q6ZVC0 841 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 GALNT4Q8N4A0 578 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 PSPC1Q8WXF1 523 aaKnown RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 FNBP1Q96RU3 617 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 BPIFA3Q9BQP9 254 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 DCLRE1BQ9H816 532 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 ABHD10Q9NUJ1 306 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 ADA2Q9NZK5 511 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 ATP1A1P05023 1023 aaKnown RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 POTEIP0CG38 1075 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 ARHGDIAP52565 204 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 KDSRQ06136 332 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 THOC5Q13769 683 aaKnown RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 TRIP13Q15645 432 aaPredicted RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 TSPYL6Q8N831 410 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 EME1Q96AY2 570 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 ZIM3Q96PE6 472 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 CAAP1Q9H8G2 361 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 SMYD2Q9NRG4 433 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 B4E1Z4 1266 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 COPEO14579 308 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 FGGP02679 453 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 TXKP42681 527 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 UBE3AQ05086 875 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 MYBPC2Q14324 1141 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 ASZ1Q8WWH4 475 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 ZNF274Q96GC6 653 aaPredicted RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 DMAP1Q9NPF5 467 aaPredicted RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 ZNF180Q9UJW8 692 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 LMBRD2Q68DH5 695 aaPredicted RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 MYOCDQ8IZQ8 938 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 DCLK2Q8N568 766 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 MSL3Q8N5Y2 521 aaKnown RBP9.39□□□□□ -0.91
YBX3-208ENST00000540447 TERB1Q8NA31 727 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 BTBD6Q96KE9 485 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 ANKIB1Q9P2G1 1089 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 LRCH1Q9Y2L9 728 aa9.39□□□□□ -0.91
YBX3-208ENST00000540447 F8VZ95 297 aa9.38□□□□□ -0.91
YBX3-208ENST00000540447 DAPK3O43293 454 aa9.38□□□□□ -0.91
YBX3-208ENST00000540447 PALMO75781 387 aa9.38□□□□□ -0.91
YBX3-208ENST00000540447 WIZO95785 1651 aa9.38□□□□□ -0.91
YBX3-208ENST00000540447 NSFP46459 744 aaKnown RBP9.38□□□□□ -0.91
YBX3-208ENST00000540447 HSPA13P48723 471 aa9.38□□□□□ -0.91
YBX3-208ENST00000540447 C21orf59P57076 290 aa9.38□□□□□ -0.91
YBX3-208ENST00000540447 FAM135BQ49AJ0 1406 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms