RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 DDB1Q16531 1140 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 ANO5Q75V66 913 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 STAG2Q8N3U4 1231 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 MMGT1Q8N4V1 131 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 UNC45AQ9H3U1 944 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 SEC31BQ9NQW1 1179 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 ANKIB1Q9P2G1 1089 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 ATP6V0A2Q9Y487 856 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 ZNF844Q08AG5 666 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 HLFQ16534 295 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 KYNUQ16719 465 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 ATP6V0A1Q93050 837 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 MYLK2Q9H1R3 596 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
PBX1-212ENST00000540236 AGAP1Q9UPQ3 857 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 ADCY10Q96PN6 1610 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 RBM47A0AV96 593 aaKnown RBP11.96□□□□□ -0.49
PBX1-212ENST00000540236 SEC24DO94855 1032 aaPredicted RBP11.96□□□□□ -0.49
PBX1-212ENST00000540236 PLS3P13797 630 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 IRX4P78413 519 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 CUL1Q13616 776 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 GPKOWQ92917 476 aaPredicted RBP eCLIP11.96□□□□□ -0.49
PBX1-212ENST00000540236 TEKT1Q969V4 418 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 SH2D4AQ9H788 454 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 PP2D1A8MPX8 630 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 RNF225M0QZC1 329 aaPredicted RBP11.96□□□□□ -0.5
PBX1-212ENST00000540236 ZBED4O75132 1171 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 ADAM9Q13443 819 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 PROSER3Q2NL68 480 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 KIAA2013Q8IYS2 634 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 GABPB2Q8TAK5 448 aaPredicted RBP11.96□□□□□ -0.5
PBX1-212ENST00000540236 TATDN2Q93075 761 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 FAM129AQ9BZQ8 928 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 MED14O60244 1454 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 P4HA2O15460 535 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 FLT3P36888 993 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 MAPK10P53779 464 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 TTLL7Q6ZT98 887 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 PCMTD2Q9NV79 361 aa11.96□□□□□ -0.5
PBX1-212ENST00000540236 FAM196BA6NMK8 535 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 ZAP70P43403 619 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 ANO4Q32M45 955 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 C11orf91Q3C1V1 193 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 C6orf118Q5T5N4 469 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 CCNJLQ8IV13 435 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 ARHGAP24Q8N264 748 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 OLFM3Q96PB7 478 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 NDE1Q9NXR1 346 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 NUP153P49790 1475 aaKnown RBP11.95□□□□□ -0.5
PBX1-212ENST00000540236 GOLGA8RI6L899 631 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 BRAFP15056 766 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 NOP14P78316 857 aaKnown RBP11.95□□□□□ -0.5
PBX1-212ENST00000540236 PI16Q6UXB8 463 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 KSR2Q6VAB6 950 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 EPM2AIP1Q7L775 607 aaPredicted RBP11.95□□□□□ -0.5
PBX1-212ENST00000540236 NUDCD3Q8IVD9 361 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 ATXN10Q9UBB4 475 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 TMEM120BA0PK00 339 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 PGM3O95394 542 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 DEXIO95424 95 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 TAF1BQ53T94 588 aaPredicted RBP11.95□□□□□ -0.5
PBX1-212ENST00000540236 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
PBX1-212ENST00000540236 FLCNQ8NFG4 579 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 SENP2Q9HC62 589 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 TMOD4Q9NZQ9 345 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 MYO5CQ9NQX4 1742 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 DDHD2O94830 711 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 TECP42680 631 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 MAGEA10P43363 369 aaPredicted RBP11.95□□□□□ -0.5
PBX1-212ENST00000540236 TMEM62Q0P6H9 643 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 CYLC2Q14093 348 aaPredicted RBP11.95□□□□□ -0.5
PBX1-212ENST00000540236 STRN4Q9NRL3 753 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 TUBE1Q9UJT0 475 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
PBX1-212ENST00000540236 MAGEB3O15480 346 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 TNFAIP3P21580 790 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 TUFMP49411 452 aaKnown RBP11.94□□□□□ -0.5
PBX1-212ENST00000540236 BLMHQ13867 455 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 TSHZ1Q6ZSZ6 1077 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 HEATR4Q86WZ0 1026 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 KBTBD3Q8NAB2 608 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 WDR35Q9P2L0 1181 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 ZNF148Q9UQR1 794 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 LMNAP02545 664 aaKnown RBP11.94□□□□□ -0.5
PBX1-212ENST00000540236 NFKBIAP25963 317 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 SMAD1Q15797 465 aaKnown RBP11.94□□□□□ -0.5
PBX1-212ENST00000540236 MMEL1Q495T6 779 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 CYB5R4Q7L1T6 521 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 FAM118BQ9BPY3 351 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 DENND2AQ9ULE3 1009 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 PTPRGP23470 1445 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 SETD1BQ9UPS6 1966 aaKnown RBP11.94□□□□□ -0.5
PBX1-212ENST00000540236 KAZNQ674X7 775 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 IFT122Q9HBG6 1241 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 CHORDC1Q9UHD1 332 aaPredicted RBP11.94□□□□□ -0.5
PBX1-212ENST00000540236 IFT140Q96RY7 1462 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 GAS8O95995 478 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 EIF4BP23588 611 aaKnown RBP11.94□□□□□ -0.5
PBX1-212ENST00000540236 ZBTB17Q13105 803 aa11.94□□□□□ -0.5
PBX1-212ENST00000540236 KIF6Q6ZMV9 814 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms