RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ZNF746Q6NUN9 644 aaPredicted RBP7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 B3GNT9Q6UX72 402 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 TRIM50Q86XT4 487 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 SMAP1Q8IYB5 467 aaPredicted RBP7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 HAS1Q92839 578 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 TEKT3Q9BXF9 490 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 VAV3Q9UKW4 847 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 NOL7Q9UMY1 257 aaKnown RBP7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 SCN5AQ14524 2016 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 MROH7Q68CQ1 1323 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 IGKV6D-21A0A0A0MT36 114 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 ARVCFO00192 962 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 STX6O43752 255 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 GAS7O60861 476 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 LGR5O75473 907 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 SUPT20HL2P0C7V6 817 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 MCM7P33993 719 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 PSEN2P49810 448 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 MLLT1Q03111 559 aaPredicted RBP7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 SPIRE1Q08AE8 756 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 RESTQ13127 1097 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 PPP2R5CQ13362 524 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 ITGA7Q13683 1181 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 BECN1Q14457 450 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 MFSD10Q14728 455 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 CALCRLQ16602 461 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 KIAA0753Q2KHM9 967 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 NBPF20Q3BBV1 942 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 RILPL1Q5EBL4 403 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 NFRKBQ6P4R8 1299 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 ABHD15Q6UXT9 468 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 ANKRD33Q7Z3H0 272 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 BRAPQ7Z569 592 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 FERMT3Q86UX7 667 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 SESTD1Q86VW0 696 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 CCDC60Q8IWA6 550 aaPredicted RBP7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 FAM126BQ8IXS8 530 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 SPRYD3Q8NCJ5 442 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 BBXQ8WY36 941 aaPredicted RBP7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 SEPT1Q8WYJ6 367 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 FAM20AQ96MK3 541 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 MTMR9Q96QG7 549 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 PCYT2Q99447 389 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 KATNAL1Q9BW62 490 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 SEZ6LQ9BYH1 1024 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 TMEM60Q9H2L4 133 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 UNC45AQ9H3U1 944 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 ZNF215Q9UL58 517 aaPredicted RBP7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 MTMR6Q9Y217 621 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 ATP11BQ9Y2G3 1177 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 TCHHQ07283 1943 aa7.88□□□□□ -1.15
LPCAT3-209ENST00000540060 WDR64B1ANS9 1081 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 H3BRB1 525 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 CHMP2AO43633 222 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 PQBP1O60828 265 aaKnown RBP7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 CD4P01730 458 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 ATP2B1P20020 1258 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 HOXC8P31273 242 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 SFNP31947 248 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 JAK3P52333 1124 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 TLE2Q04725 743 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 PTPN11Q06124 597 aaPredicted RBP7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 UTP14CQ5TAP6 766 aaKnown RBP7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 MIS18BP1Q6P0N0 1132 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 SLFN12Q8IYM2 578 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 C7orf61Q8IZ16 206 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 C4orf32Q8N8J7 132 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 RDM1Q8NG50 284 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 AFAP1L1Q8TED9 768 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 PPP1R13LQ8WUF5 828 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 VTI1AQ96AJ9 217 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 TOX2Q96NM4 488 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 TUT1Q9H6E5 874 aaKnown RBP7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 PDLIM7Q9NR12 457 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 ERAP1Q9NZ08 941 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 GTF2IRD1Q9UHL9 959 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 TCEAL9Q9UHQ7 104 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 PCDHB6Q9Y5E3 794 aa7.87□□□□□ -1.15
LPCAT3-209ENST00000540060 EVPLQ92817 2033 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 EML1O00423 815 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 EVI5O60447 810 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 B4GALT4O60513 344 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 BAG4O95429 457 aaKnown RBP7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 PSAPP07602 524 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 CLTBP09497 229 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 OR52Z1P0C646 297 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 SMIM10L2AP0DMW4 78 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 SMIM10L2BP0DMW5 78 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 PDIA4P13667 645 aaKnown RBP7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 MARK3P27448 753 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 SLC26A2P50443 739 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 STAT5BP51692 787 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 CHMP4BP1P59074 171 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 FAAP100Q0VG06 881 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 PKP1Q13835 747 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 HIC1Q14526 733 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 ZNF174Q15697 407 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 UGCGQ16739 394 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 FAM47CQ5HY64 1035 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms