RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 JAK2O60674 1132 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 LILRA1O75019 489 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 LARGE1O95461 756 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 GJB1P08034 283 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 TXNP10599 105 aaKnown RBP7.36□□□□□ -1.23
SNHG1-212ENST00000539975 TGFB3P10600 412 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 BMP2P12643 396 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 GJB2P29033 226 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 GHRHRQ02643 423 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 CBLBQ13191 982 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 SEMA3FQ13275 785 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 PGM5Q15124 567 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 NONOQ15233 471 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNHG1-212ENST00000539975 UBE2SQ16763 222 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 SLC35G1Q2M3R5 365 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 CCDC144BQ3MJ40 725 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 PRAMEF19Q5SWL8 479 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 PCNX4Q63HM2 1172 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 LARP1BQ659C4 914 aaKnown RBP7.36□□□□□ -1.23
SNHG1-212ENST00000539975 MCTP1Q6DN14 999 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 RNF180Q86T96 592 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 VSIG10LQ86VR7 867 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 INTS4Q96HW7 963 aaKnown RBP7.36□□□□□ -1.23
SNHG1-212ENST00000539975 DEFB118Q96PH6 123 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 PURBQ96QR8 312 aaKnown RBP7.36□□□□□ -1.23
SNHG1-212ENST00000539975 PDCD2LQ9BRP1 358 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 ANO3Q9BYT9 981 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 WDR11Q9BZH6 1224 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 XPNPEP3Q9NQH7 507 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 FLRT1Q9NZU1 646 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 DDX20Q9UHI6 824 aaKnown RBP7.36□□□□□ -1.23
SNHG1-212ENST00000539975 KCNJ14Q9UNX9 436 aa7.36□□□□□ -1.23
SNHG1-212ENST00000539975 NOP56O00567 594 aaKnown RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 OPLAHO14841 1288 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 FIBPO43427 364 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 DUSP11O75319 330 aaKnown RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 SGPL1O95470 568 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 CTDNEP1O95476 244 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 SNAI1O95863 264 aaPredicted RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 MMP1P03956 469 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 ADH1AP07327 375 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 CYBAP13498 195 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 SNRPBP14678 240 aaKnown RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 CCND3P30281 292 aaPredicted RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 CPT1AP50416 773 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 USP11P51784 963 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 CAP1Q01518 475 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 MTMR1Q13613 665 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 NEDD9Q14511 834 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 MAP3K21Q5TCX8 1036 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 KRT40Q6A162 431 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 FBXO16Q8IX29 292 aaPredicted RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 DHX37Q8IY37 1157 aaKnown RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 PCSK9Q8NBP7 692 aaKnown RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 DAGLBQ8NCG7 672 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 MORC4Q8TE76 937 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 U2AF1L4Q8WU68 220 aaKnown RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 VTI1AQ96AJ9 217 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 POM121Q96HA1 1249 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 PHF20Q9BVI0 1012 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 MLXIPQ9HAP2 919 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 RTEL1Q9NZ71 1219 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 NOL7Q9UMY1 257 aaKnown RBP7.35□□□□□ -1.23
SNHG1-212ENST00000539975 Q9Y3F1 56 aa7.35□□□□□ -1.23
SNHG1-212ENST00000539975 DYNC1LI2O43237 492 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 SPINT1O43278 529 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 KPNA6O60684 536 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 BAG4O95429 457 aaKnown RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 GH1P01241 217 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 C6orf222P0C671 652 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 ZNF865P0CJ78 1059 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 FDPSP14324 419 aaKnown RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 EDNRBP24530 442 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 SREBF1P36956 1147 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 ADCYAP1R1P41586 468 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 GJA8P48165 433 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 ARHGAP4P98171 946 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 SETQ01105 290 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 GUCY1B3Q02153 619 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 LAMC2Q13753 1193 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 MTFR1Q15390 333 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 DUSP28Q4G0W2 176 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 CEP55Q53EZ4 464 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 GNASQ5JWF2 1037 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 C6orf118Q5T5N4 469 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 PIK3AP1Q6ZUJ8 805 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 DIS3L2Q8IYB7 885 aaKnown RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 PHTF2Q8N3S3 785 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 FBXO18Q8NFZ0 1043 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 OR6J1Q8NGC5 347 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 TBCKQ8TEA7 893 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 TNPO1Q92973 898 aaKnown RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 GPRASP2Q96D09 838 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 AIFM3Q96NN9 605 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 SDF4Q9BRK5 362 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 FOXP1Q9H334 677 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 PAK6Q9NQU5 681 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-212ENST00000539975 TMEM260Q9NX78 707 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 COL20A1Q9P218 1284 aa7.34□□□□□ -1.23
SNHG1-212ENST00000539975 PCDHB11Q9Y5F2 797 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms