RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ADAMTS5Q9UNA0 930 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 TRAF3IP3Q9Y228 551 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 ARHGEF35A5YM69 484 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 USP27XA6NNY8 438 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 TRAF5O00463 557 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 RIOK3O14730 519 aaKnown RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 KIF3CO14782 793 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 SLC16A3O15427 465 aaKnown RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 KIF5CO60282 957 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 SLITRK3O94933 977 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 LYPLA2O95372 231 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 P4HBP07237 508 aaKnown RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 MAPTP10636 758 aaKnown RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 GUCY2CP25092 1073 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 CCND2P30279 289 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 NF2P35240 595 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 KRT76Q01546 638 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 MTMR1Q13613 665 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 KNOP1Q1ED39 458 aaKnown RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 B3GNT9Q6UX72 402 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 ZNF662Q6ZS27 426 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 LRRC55Q6ZSA7 311 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 MIER3Q7Z3K6 550 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 SULF1Q8IWU6 871 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 TPH2Q8IWU9 490 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 CPXCR1Q8N123 301 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 EHBP1Q8NDI1 1231 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 CPLX3Q8WVH0 158 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 GPRASP2Q96D09 838 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 REEP2Q9BRK0 252 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 TEX13BQ9BXU2 312 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 ZHX3Q9H4I2 956 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 AGO4Q9HCK5 861 aaKnown RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 RNF146Q9NTX7 359 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 TYW1Q9NV66 732 aaKnown RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 FBXO40Q9UH90 709 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 DBR1Q9UK59 544 aaKnown RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 DAAM1Q9Y4D1 1078 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
SPARC-209ENST00000539687 PCDHA2Q9Y5H9 948 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 CSADQ9Y600 493 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 ZHX2Q9Y6X8 837 aa11.24□□□□□ -0.61
SPARC-209ENST00000539687 NFIBO00712 420 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 CTIFO43310 598 aaKnown RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 ABCD1P33897 745 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 COPB2P35606 906 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 EPS15P42566 896 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 IREB2P48200 963 aaKnown RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 FXR1P51114 621 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPARC-209ENST00000539687 SNRPFP62306 86 aaKnown RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 RPS6P62753 249 aaKnown RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 TUBB4BP68371 445 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 CYP4A11Q02928 519 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 MYBPC2Q14324 1141 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 MEA1Q16626 185 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 GNPTABQ3T906 1256 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 ARSHQ5FYA8 562 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 ARHGEF16Q5VV41 709 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 RINT1Q6NUQ1 792 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 CATSPERGQ6ZRH7 1159 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 FMNL3Q8IVF7 1028 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 REXO1L1PQ8IX06 675 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPARC-209ENST00000539687 CYP2W1Q8TAV3 490 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 NSUN6Q8TEA1 469 aaKnown RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 SCFD1Q8WVM8 642 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 TBC1D5Q92609 795 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 GJA10Q969M2 543 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 ERO1AQ96HE7 468 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 DYDC2Q96IM9 177 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 CCDC43Q96MW1 224 aaKnown RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 IWS1Q96ST2 819 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 MKNK1Q9BUB5 465 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 UNC45AQ9H3U1 944 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 ACAD9Q9H845 621 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 MRPL44Q9H9J2 332 aaKnown RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 PARVGQ9HBI0 331 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 PXMP2Q9NR77 195 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 KCNH7Q9NS40 1196 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 CGNQ9P2M7 1197 aaKnown RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 KCNG1Q9UIX4 513 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 ADGRG1Q9Y653 693 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
SPARC-209ENST00000539687 WDR90Q96KV7 1748 aa11.23□□□□□ -0.61
SPARC-209ENST00000539687 TTC26A0AVF1 554 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 WDR64B1ANS9 1081 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 EML1O00423 815 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 CHMP2AO43633 222 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 COBLO75128 1261 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 SLU7O95391 586 aaKnown RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 ARP10275 920 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 EPB41P11171 864 aaKnown RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 ITGB5P18084 799 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms