RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 IGBP1P78318 339 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 SETQ01105 290 aaPredicted RBP12.14□□□□□ -0.47
HMGA2-209ENST00000539662 ZNF618Q5T7W0 954 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 SWSAP1Q6NVH7 229 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
HMGA2-209ENST00000539662 SERINC5Q86VE9 423 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 FAM177A1Q8N128 213 aaPredicted RBP12.14□□□□□ -0.47
HMGA2-209ENST00000539662 TMEM199Q8N511 208 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 ATP6V0A1Q93050 837 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
HMGA2-209ENST00000539662 UNC45AQ9H3U1 944 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 SMARCAD1Q9H4L7 1026 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 IL23AQ9NPF7 189 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 KAT6AQ92794 2004 aa12.14□□□□□ -0.47
HMGA2-209ENST00000539662 GRXCR1A8MXD5 290 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 ST18O60284 1047 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 NBNO60934 754 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 PSMD10O75832 226 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 INSRRP14616 1297 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 XBP1P17861 261 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 STAT5BP51692 787 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 PPFIA1Q13136 1202 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 PTK7Q13308 1070 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 PPIGQ13427 754 aaKnown RBP eCLIP12.13□□□□□ -0.47
HMGA2-209ENST00000539662 GRIK4Q16099 956 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 UGCGQ16739 394 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 LRIT3Q3SXY7 679 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 LRCH2Q5VUJ6 765 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 OTOP2Q7RTS6 562 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 NEK8Q86SG6 692 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 HAS1Q92839 578 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 C8orf76Q96K31 380 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 ERAP1Q9NZ08 941 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 DDX25Q9UHL0 483 aaKnown RBP12.13□□□□□ -0.47
HMGA2-209ENST00000539662 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
HMGA2-209ENST00000539662 PTPRSQ13332 1948 aa12.13□□□□□ -0.47
HMGA2-209ENST00000539662 GBF1Q92538 1859 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 MYH9P35579 1960 aaKnown RBP12.12□□□□□ -0.47
HMGA2-209ENST00000539662 ZBTB42B2RXF5 422 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 EML1O00423 815 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 BACH1O14867 736 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 ZNF862O60290 1169 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 CCNT1O60563 726 aaKnown RBP12.12□□□□□ -0.47
HMGA2-209ENST00000539662 CTSHP09668 335 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 ATP2B1P20020 1258 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 THPOP40225 353 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 RASIP1Q5U651 963 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 ZNF746Q6NUN9 644 aaPredicted RBP12.12□□□□□ -0.47
HMGA2-209ENST00000539662 Q7L0L9 218 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 LRRC8DQ7L1W4 858 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 FBXO18Q8NFZ0 1043 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 RNPC3Q96LT9 517 aaKnown RBP12.12□□□□□ -0.47
HMGA2-209ENST00000539662 KCNMB3Q9NPA1 279 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 ZNF302Q9NR11 478 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 TBC1D22BQ9NU19 505 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 GABBR1Q9UBS5 961 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 VAV3Q9UKW4 847 aa12.12□□□□□ -0.47
HMGA2-209ENST00000539662 TMEM150BA6NC51 233 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 GAS7O60861 476 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 SELPP16109 830 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 RBL2Q08999 1139 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 BFSP2Q13515 415 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 NBR1Q14596 966 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 PPP4R3AQ6IN85 833 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 MIS18BP1Q6P0N0 1132 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 MOXD1Q6UVY6 613 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 RETREG2Q8NC44 543 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 CAGE1Q8TC20 777 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 AFAP1L1Q8TED9 768 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 RIT2Q99578 217 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 AZI2Q9H6S1 392 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 DISC1Q9NRI5 854 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 TRPC6Q9Y210 931 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 PCDHA10Q9Y5I2 948 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 MAFBQ9Y5Q3 323 aaPredicted RBP12.11□□□□□ -0.47
HMGA2-209ENST00000539662 LOXHD1Q8IVV2 1947 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 CHD9Q3L8U1 2897 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
HMGA2-209ENST00000539662 EVPLQ92817 2033 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 POTEB3A0JP26 581 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 MBLAC1A4D2B0 266 aaPredicted RBP12.1□□□□□ -0.47
HMGA2-209ENST00000539662 STBD1O95210 358 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 FGBP02675 491 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 GJB2P29033 226 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 PBX2P40425 430 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 HMGN5P82970 282 aaKnown RBP12.1□□□□□ -0.47
HMGA2-209ENST00000539662 KRT76Q01546 638 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 TMEM62Q0P6H9 643 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 TRIM29Q14134 588 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 PDXDC2PQ6P474 469 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 POTEBQ6S5H4 581 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 TMCO2Q7Z6W1 182 aaPredicted RBP12.1□□□□□ -0.47
HMGA2-209ENST00000539662 FAM184AQ8NB25 1140 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 DNAJB3Q8WWF6 145 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 HERVK_113Q902F9 699 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 SH2D3AQ9BRG2 576 aa12.1□□□□□ -0.47
HMGA2-209ENST00000539662 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms