RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 CTDNEP1O95476 244 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 GH2P01242 217 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 SUPT20HL2P0C7V6 817 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 GUCY1A2P33402 732 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 NOVP48745 357 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 MTMR3Q13615 1198 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 ACVR2BQ13705 512 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 PLS1Q14651 629 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 GPNMBQ14956 572 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 SEPT2Q15019 361 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 ABCB5Q2M3G0 1257 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 TSR1Q2NL82 804 aaKnown RBP6.23□□□□□ -1.41
CELF1-220ENST00000539455 CCDC144BQ3MJ40 725 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 VARS2Q5ST30 1063 aaKnown RBP6.23□□□□□ -1.41
CELF1-220ENST00000539455 ZC3H14Q6PJT7 736 aaKnown RBP6.23□□□□□ -1.41
CELF1-220ENST00000539455 UNQ6494/PRO21346Q6UXR6 183 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 RASGRP2Q7LDG7 609 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 FBXO11Q86XK2 927 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 DGKHQ86XP1 1220 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 TMEM192Q8IY95 271 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 ZNF654Q8IZM8 581 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 LRRC47Q8N1G4 583 aaKnown RBP6.23□□□□□ -1.41
CELF1-220ENST00000539455 RETREG2Q8NC44 543 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 ADAM32Q8TC27 787 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 CCDC17Q96LX7 622 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 FEZ1Q99689 392 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 TMEM47Q9BQJ4 181 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 CDHR5Q9HBB8 845 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 GINM1Q9NU53 330 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 MTMR4Q9NYA4 1195 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 NCDNQ9UBB6 729 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 STX8Q9UNK0 236 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 SORCS3Q9UPU3 1222 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 INSL6Q9Y581 213 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 ITPR1Q14643 2758 aa6.23□□□□□ -1.41
CELF1-220ENST00000539455 RALGAPA2Q2PPJ7 1873 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 TENM4Q6N022 2769 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 SLC30A4O14863 429 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 PPFIA3O75145 1194 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 DDAH1O94760 285 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 TOP1P11387 765 aaKnown RBP6.22□□□□□ -1.41
CELF1-220ENST00000539455 NPR3P17342 541 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 ATF7P17544 494 aaPredicted RBP6.22□□□□□ -1.41
CELF1-220ENST00000539455 TGM1P22735 817 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 CDC27P30260 824 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 ADD1P35611 737 aaKnown RBP6.22□□□□□ -1.41
CELF1-220ENST00000539455 DDIT3P35638 169 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 METAP2P50579 478 aaKnown RBP eCLIP6.22□□□□□ -1.41
CELF1-220ENST00000539455 USP14P54578 494 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 HTRA4P83105 476 aaPredicted RBP6.22□□□□□ -1.41
CELF1-220ENST00000539455 TROAPQ12815 778 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 RAB3GAP1Q15042 981 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 CCDC178Q5BJE1 867 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 N4BP2L1Q5TBK1 243 aaPredicted RBP6.22□□□□□ -1.41
CELF1-220ENST00000539455 LARP1BQ659C4 914 aaKnown RBP6.22□□□□□ -1.41
CELF1-220ENST00000539455 CNKSR3Q6P9H4 555 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 SYNE3Q6ZMZ3 975 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 TMEM179Q6ZVK1 233 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 CATIPQ7Z7H3 387 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 SIAH1Q8IUQ4 282 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 TMTC2Q8N394 836 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 MSL3Q8N5Y2 521 aaKnown RBP6.22□□□□□ -1.41
CELF1-220ENST00000539455 PNMA1Q8ND90 353 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 SUSD6Q92537 303 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 CHMP4CQ96CF2 233 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 INTS4Q96HW7 963 aaKnown RBP6.22□□□□□ -1.41
CELF1-220ENST00000539455 KIAA1683Q9H0B3 1180 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 KAT14Q9H8E8 782 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 FAM217BQ9NTX9 383 aaPredicted RBP6.22□□□□□ -1.41
CELF1-220ENST00000539455 HOXC10Q9NYD6 342 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 CLIP2Q9UDT6 1046 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 MTMR7Q9Y216 660 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 TET1Q8NFU7 2136 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 ZNF462Q96JM2 2506 aa6.22□□□□□ -1.41
CELF1-220ENST00000539455 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.21□□□□□ -1.42
CELF1-220ENST00000539455 PTPDC1A2A3K4 754 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 GRM6O15303 877 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 PLEKHA8P1O95397 391 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 TTLL1O95922 423 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 SP9P0CG40 484 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 EEF2P13639 858 aaKnown RBP6.21□□□□□ -1.42
CELF1-220ENST00000539455 GJB2P29033 226 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 RCAN1P53805 252 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 ICA1Q05084 483 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 COG2Q14746 738 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 NTRK3Q16288 839 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 FSCN1Q16658 493 aaKnown RBP6.21□□□□□ -1.42
CELF1-220ENST00000539455 RTN1Q16799 776 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 MAMDC4Q6UXC1 1216 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 CMTR1Q8N1G2 835 aaKnown RBP6.21□□□□□ -1.42
CELF1-220ENST00000539455 MB21D1Q8N884 522 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 NSUN7Q8NE18 718 aaKnown RBP6.21□□□□□ -1.42
CELF1-220ENST00000539455 SMARCC2Q8TAQ2 1214 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 ACER1Q8TDN7 264 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 DDX11Q96FC9 970 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 RTP3Q9BQQ7 232 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 KANSL2Q9H9L4 492 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 SLC24A3Q9HC58 644 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 CABP5Q9NP86 173 aa6.21□□□□□ -1.42
CELF1-220ENST00000539455 NPDC1Q9NQX5 325 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms