RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SARNPP82979 210 aaKnown RBP15.74■□□□□ 0.11
CACNB1-206ENST00000539338 CTTNQ14247 550 aaKnown RBP15.74■□□□□ 0.11
CACNB1-206ENST00000539338 SGO2Q562F6 1265 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 SESTD1Q86VW0 696 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 ENAHQ8N8S7 591 aaPredicted RBP15.74■□□□□ 0.11
CACNB1-206ENST00000539338 RNF169Q8NCN4 708 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 ANO3Q9BYT9 981 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 NRBP2Q9NSY0 501 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 HESX1Q9UBX0 185 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 MAD1L1Q9Y6D9 718 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 PNPLA6Q8IY17 1366 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 SYNJ2BP-COX16A0A087WUM0 186 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 SFI1A8K8P3 1242 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 SGK1O00141 431 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 BPIFB4P59827 614 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 FAM160B1Q5W0V3 765 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 CLEC17AQ6ZS10 378 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 RAB3IPQ96QF0 476 aaPredicted RBP15.74■□□□□ 0.11
CACNB1-206ENST00000539338 COX16Q9P0S2 106 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 MED14O60244 1454 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 PNMA6FA0A0J9YX94 578 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 POTEMA6NI47 508 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 CAPN9O14815 690 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 CETPP11597 493 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 MICALL2Q8IY33 904 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 LRRC8CQ8TDW0 803 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 RUNDC3BQ96NL0 473 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 STK36Q9NRP7 1315 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 HIP1RO75146 1068 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 CHRNA5P30532 468 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 DDIT3P35638 169 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 STAT2P52630 851 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 LRRC63Q05C16 580 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 NSMCE1Q8WV22 266 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 ADPGKQ9BRR6 497 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 PARVGQ9HBI0 331 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 ABHD10Q9NUJ1 306 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 QRICH2Q9H0J4 1663 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 UBN2Q6ZU65 1347 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 SESN3P58005 492 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 MUM1Q2TAK8 710 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 DHX40Q8IX18 779 aaKnown RBP15.73■□□□□ 0.11
CACNB1-206ENST00000539338 ATP6V0A1Q93050 837 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 FHDC1Q9C0D6 1143 aaPredicted RBP15.73■□□□□ 0.11
CACNB1-206ENST00000539338 BHMT2Q9H2M3 363 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 FOXN1O15353 648 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 ACTN1P12814 892 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 PFKFB3Q16875 520 aaPredicted RBP15.73■□□□□ 0.11
CACNB1-206ENST00000539338 STOX1Q6ZVD7 989 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 PPP4R1Q8TF05 950 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 EXOC4Q96A65 974 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 WRNIP1Q96S55 665 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 HTATIP2Q9BUP3 242 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 SETD1BQ9UPS6 1966 aaKnown RBP15.73■□□□□ 0.11
CACNB1-206ENST00000539338 ASNSP08243 561 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 PRCPP42785 496 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
CACNB1-206ENST00000539338 CCDC197Q8NCU1 140 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 ADARB2Q9NS39 739 aaKnown RBP15.73■□□□□ 0.11
CACNB1-206ENST00000539338 USP17L5A8MUK1 530 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 SCARF1Q14162 830 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 KIAA1841Q6NSI8 718 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 PBKQ96KB5 322 aa15.73■□□□□ 0.11
CACNB1-206ENST00000539338 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.73■□□□□ 0.11
CACNB1-206ENST00000539338 TRIP13Q15645 432 aaPredicted RBP15.72■□□□□ 0.11
CACNB1-206ENST00000539338 RFX6Q8HWS3 928 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 RPUSD2Q8IZ73 545 aaKnown RBP15.72■□□□□ 0.11
CACNB1-206ENST00000539338 SLC44A5Q8NCS7 719 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 HOXC10Q9NYD6 342 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 RNF14Q9UBS8 474 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 RPAP1Q9BWH6 1393 aaPredicted RBP15.72■□□□□ 0.11
CACNB1-206ENST00000539338 GOLGA8SH3BPF8 625 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 ECEL1O95672 775 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 SAT1P21673 171 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 NME8Q8N427 588 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 TMEM47Q9BQJ4 181 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 JPH2Q9BR39 696 aaPredicted RBP15.72■□□□□ 0.11
CACNB1-206ENST00000539338 SH3GLB2Q9NR46 395 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 NFU1Q9UMS0 254 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 ARHGEF37A1IGU5 675 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 ZSCAN20P17040 1043 aaPredicted RBP15.72■□□□□ 0.11
CACNB1-206ENST00000539338 SEPT2Q15019 361 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 ALKBH5Q6P6C2 394 aaKnown RBP15.72■□□□□ 0.11
CACNB1-206ENST00000539338 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 HAUS1Q96CS2 278 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 EFCC1Q9HA90 598 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 PI4KBQ9UBF8 816 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 TACC3Q9Y6A5 838 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 CTNND1O60716 968 aaKnown RBP15.72■□□□□ 0.11
CACNB1-206ENST00000539338 IFRD2Q12894 506 aaPredicted RBP15.72■□□□□ 0.11
CACNB1-206ENST00000539338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.72■□□□□ 0.11
CACNB1-206ENST00000539338 BPIFA3Q9BQP9 254 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 VCXQ9H320 206 aa15.72■□□□□ 0.11
CACNB1-206ENST00000539338 GOLGA8IPA6NC78 632 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 GOLGA8JA6NMD2 632 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 SUN1O94901 812 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 BAG2O95816 211 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 NXNQ6DKJ4 435 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms