RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 APBA2Q99767 749 aa3.29□□□□□ -1.88
CBX3P4-201ENST00000538909 KIAA1683Q9H0B3 1180 aa3.29□□□□□ -1.88
CBX3P4-201ENST00000538909 NRDE2Q9H7Z3 1164 aa3.29□□□□□ -1.88
CBX3P4-201ENST00000538909 PUF60Q9UHX1 559 aaKnown RBP3.29□□□□□ -1.88
CBX3P4-201ENST00000538909 KRIT1O00522 736 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 ARHGAP6O43182 974 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 SNRPB2P08579 225 aaKnown RBP3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 ENO2P09104 434 aaPredicted RBP3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 FAHP16930 419 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 SLC25A3Q00325 362 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 RRP1BQ14684 758 aaKnown RBP3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 GRM7Q14831 915 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 PRSS53Q2L4Q9 553 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 PAN2Q504Q3 1202 aaKnown RBP3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 ZNF362Q5T0B9 420 aaPredicted RBP3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 MBNL2Q5VZF2 373 aaKnown RBP3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 PAPD7Q5XG87 772 aaKnown RBP3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 VHLLQ6RSH7 139 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 PPIL6Q8IXY8 311 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 THEMISQ8N1K5 641 aaPredicted RBP3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 TTLL11Q8NHH1 800 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 JAM3Q9BX67 310 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 GPRC5BQ9NZH0 403 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 SMARCA4P51532 1647 aa3.28□□□□□ -1.88
CBX3P4-201ENST00000538909 ZNF839A8K0R7 811 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 TBX1O43435 398 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 LTBRP36941 435 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 KCNJ6P48051 423 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 TUSC3Q13454 348 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 TOP3AQ13472 1001 aaPredicted RBP3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 PCOLCEQ15113 449 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 CD276Q5ZPR3 534 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 SPTY2D1Q68D10 685 aaPredicted RBP3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 SYCE2Q6PIF2 218 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 SND1Q7KZF4 910 aaKnown RBP eCLIP3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 VRK3Q8IV63 474 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 CFHR4Q92496 578 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 MRGPRX3Q96LB0 322 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 SLC39A2Q9NP94 309 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 CECR2Q9BXF3 1484 aa3.27□□□□□ -1.89
CBX3P4-201ENST00000538909 BAZ1AQ9NRL2 1556 aaPredicted RBP3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 KRTAP23-1A1A580 65 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 CUTAO60888 179 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 ITGAVP06756 1048 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 KCNQ1P51787 676 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 EIF6P56537 245 aaKnown RBP3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 SF1Q15637 639 aaKnown RBP3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 COLEC12Q5KU26 742 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 CYP4F22Q6NT55 531 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 PRIMA1Q86XR5 153 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 ADGRG3Q86Y34 549 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 GPR135Q8IZ08 494 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 KREMEN2Q8NCW0 462 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 SCYL1Q96KG9 808 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 BBC3Q96PG8 261 aaPredicted RBP3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 SLC6A20Q9NP91 592 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 PCDHGB7Q9Y5F8 929 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 CC2D2AQ9P2K1 1620 aa3.26□□□□□ -1.89
CBX3P4-201ENST00000538909 HMGXB3Q12766 1538 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 ZAR1LA6NP61 321 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 CYP27B1O15528 508 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 PEX11BO96011 259 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 HMGCRP04035 888 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 CDK4P11802 303 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 ADCY8P40145 1251 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 ETV4P43268 484 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 NFYCQ13952 458 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 WDR72Q3MJ13 1102 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 ACBD5Q5T8D3 534 aaPredicted RBP3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 LARP4Q71RC2 724 aaKnown RBP eCLIP3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 ADGRE4PQ86SQ3 457 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 C19orf47Q8N9M1 422 aaKnown RBP3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 OR14K1Q8NGZ2 314 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 GINM1Q9NU53 330 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 PPARGC1AQ9UBK2 798 aaKnown RBP3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 MROH2BQ7Z745 1585 aa3.25□□□□□ -1.89
CBX3P4-201ENST00000538909 ATAD2BQ9ULI0 1458 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 A0A0A6YYK5 440 aaPredicted RBP3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 INO80B-WBP1J3KQ70 363 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 FAM20BO75063 409 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 RHOBTB3O94955 611 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 NAT2P11245 290 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 COL6A2P12110 1019 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 CD38P28907 300 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 HOXC12P31275 282 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 SCNN1GP51170 649 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 CNGB1Q14028 1251 aaPredicted RBP3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 ZNF394Q53GI3 561 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 DENND5AQ6IQ26 1287 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 Q6ZRM9 215 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 USP30Q70CQ3 517 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 MRGPREQ86SM8 312 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 INO80BQ9C086 356 aaPredicted RBP3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 NELFAQ9H3P2 528 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 CDC42EP3Q9UKI2 254 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 TELO2Q9Y4R8 837 aa3.24□□□□□ -1.89
CBX3P4-201ENST00000538909 NCAPD3P42695 1498 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 GIPRP48546 466 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 STRIP1Q5VSL9 837 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms