RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KIF3AQ9Y496 699 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 GBF1Q92538 1859 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 TBX3O15119 743 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 CABYRO75952 493 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 SMIM10L2AP0DMW4 78 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 SMIM10L2BP0DMW5 78 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 CYP2C9P11712 490 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 KRT76Q01546 638 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 MLLT1Q03111 559 aaPredicted RBP14.78□□□□□ -0.04
CHFR-216ENST00000538235 CALCRLQ16602 461 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 SESTD1Q86VW0 696 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 AFAP1L1Q8TED9 768 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 OSBPL7Q9BZF2 842 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 TBC1D22BQ9NU19 505 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 GTF2IRD1Q9UHL9 959 aa14.78□□□□□ -0.04
CHFR-216ENST00000538235 RANBP2P49792 3224 aaKnown RBP14.77□□□□□ -0.04
CHFR-216ENST00000538235 PP2D1A8MPX8 630 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 ZEB2O60315 1214 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 OR52Z1P0C646 297 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 TRAPPC10P48553 1259 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 PTGDRQ13258 359 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 GNL2Q13823 731 aaKnown RBP14.77□□□□□ -0.05
CHFR-216ENST00000538235 PTPAQ15257 358 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 TRIM71Q2Q1W2 868 aaKnown RBP14.77□□□□□ -0.05
CHFR-216ENST00000538235 MARCH8Q5T0T0 291 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 SWSAP1Q6NVH7 229 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 TRAF7Q6Q0C0 670 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 BANK1Q8NDB2 785 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 LMBR1Q8WVP7 490 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 FAM20AQ96MK3 541 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 DISC1Q9NRI5 854 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 SETD4Q9NVD3 440 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 RGL1Q9NZL6 768 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 GABBR1Q9UBS5 961 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 MAFBQ9Y5Q3 323 aaPredicted RBP14.77□□□□□ -0.05
CHFR-216ENST00000538235 CLIC4Q9Y696 253 aa14.77□□□□□ -0.05
CHFR-216ENST00000538235 H0YGN5 161 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 ZBTB39O15060 712 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 KPNA6O60684 536 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 TXKP42681 527 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 ATP2C1P98194 919 aaPredicted RBP14.76□□□□□ -0.05
CHFR-216ENST00000538235 FAM47CQ5HY64 1035 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 NCAPH2Q6IBW4 605 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 NFRKBQ6P4R8 1299 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 RUFY4Q6ZNE9 571 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 MIER3Q7Z3K6 550 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 LRRC15Q8TF66 581 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 VTI1AQ96AJ9 217 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 USP28Q96RU2 1077 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 CEP89Q96ST8 783 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 SH2D3AQ9BRG2 576 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 WNT8AQ9H1J5 351 aa14.76□□□□□ -0.05
CHFR-216ENST00000538235 TTC12Q9H892 705 aaPredicted RBP14.76□□□□□ -0.05
CHFR-216ENST00000538235 MICAL3Q7RTP6 2002 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 A0A087WWV3 80 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 WDR64B1ANS9 1081 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 TREHO43280 583 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 BRD1O95696 1058 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 F13A1P00488 732 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 CLTBP09497 229 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 ZSCAN22P10073 491 aaPredicted RBP14.75□□□□□ -0.05
CHFR-216ENST00000538235 PDCP20941 246 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 STAT5BP51692 787 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 PRKCEQ02156 737 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 GPNMBQ14956 572 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 ECM1Q16610 540 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 BRDTQ58F21 947 aaPredicted RBP14.75□□□□□ -0.05
CHFR-216ENST00000538235 RILPL1Q5EBL4 403 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 BRAPQ7Z569 592 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 SMAP1Q8IYB5 467 aaPredicted RBP14.75□□□□□ -0.05
CHFR-216ENST00000538235 ZNF579Q8NAF0 562 aaKnown RBP14.75□□□□□ -0.05
CHFR-216ENST00000538235 DPF3Q92784 378 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 DYDC2Q96IM9 177 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 TOX2Q96NM4 488 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 HTATIP2Q9BUP3 242 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 NOC4LQ9BVI4 516 aaKnown RBP14.75□□□□□ -0.05
CHFR-216ENST00000538235 ZNF302Q9NR11 478 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 NOL7Q9UMY1 257 aaKnown RBP14.75□□□□□ -0.05
CHFR-216ENST00000538235 PCDHA10Q9Y5I2 948 aa14.75□□□□□ -0.05
CHFR-216ENST00000538235 BACH1O14867 736 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 KIAA0355O15063 1070 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 EVI5O60447 810 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 MED24O75448 989 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 SPATA31C1P0DKV0 1188 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 INSRRP14616 1297 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 CDC25AP30304 524 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 JAK3P52333 1124 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 EPHB4P54760 987 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 CYP4A11Q02928 519 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 ORC2Q13416 577 aaPredicted RBP14.74□□□□□ -0.05
CHFR-216ENST00000538235 CTTNQ14247 550 aaKnown RBP14.74□□□□□ -0.05
CHFR-216ENST00000538235 SF3A1Q15459 793 aaKnown RBP14.74□□□□□ -0.05
CHFR-216ENST00000538235 GRIK4Q16099 956 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 TCTN1Q2MV58 587 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 FOXD4L6Q3SYB3 417 aaPredicted RBP14.74□□□□□ -0.05
CHFR-216ENST00000538235 PLA2G4FQ68DD2 849 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 MIS18BP1Q6P0N0 1132 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 FOXD4L3Q6VB84 417 aaPredicted RBP14.74□□□□□ -0.05
CHFR-216ENST00000538235 PLPPR4Q7Z2D5 763 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 TRMT1LQ7Z2T5 733 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms