RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 HSPA1LP34931 641 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 SLCO1A2P46721 670 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 DEUP1Q05D60 604 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 MCL1Q07820 350 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 IMMTQ16891 758 aaKnown RBP11.63□□□□□ -0.55
RTN3-208ENST00000537981 WASHC4Q2M389 1173 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 CERKLQ49MI3 558 aaPredicted RBP11.63□□□□□ -0.55
RTN3-208ENST00000537981 LMNTD2Q8IXW0 634 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 EPB41L4BQ9H329 900 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 METTL5Q9NRN9 209 aaKnown RBP11.63□□□□□ -0.55
RTN3-208ENST00000537981 ZNHIT6Q9NWK9 470 aaKnown RBP11.63□□□□□ -0.55
RTN3-208ENST00000537981 ATP8A1Q9Y2Q0 1164 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 BZW2Q9Y6E2 419 aaKnown RBP11.63□□□□□ -0.55
RTN3-208ENST00000537981 GOLGA8AA7E2F4 631 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 OAS1P00973 400 aaKnown RBP11.63□□□□□ -0.55
RTN3-208ENST00000537981 SRGNP10124 158 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 LACTBP83111 547 aaPredicted RBP11.63□□□□□ -0.55
RTN3-208ENST00000537981 PLOD1Q02809 727 aaPredicted RBP11.63□□□□□ -0.55
RTN3-208ENST00000537981 RUFY4Q6ZNE9 571 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 KSR1Q8IVT5 923 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 NLGN1Q8N2Q7 840 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 CRAMP1Q96RY5 1269 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 THAP9Q9H5L6 903 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 RNPEPL1Q9HAU8 725 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.63□□□□□ -0.55
RTN3-208ENST00000537981 USH1CQ9Y6N9 552 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 CHD4Q14839 1912 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 A0A1W2PQC6 194 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 AKR1B10O60218 316 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 USO1O60763 962 aaKnown RBP11.62□□□□□ -0.55
RTN3-208ENST00000537981 CALB2P22676 271 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
RTN3-208ENST00000537981 ZNF174Q15697 407 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 P3H1Q32P28 736 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 ESCO1Q5FWF5 840 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 SFMBT2Q5VUG0 894 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 C11orf96Q7Z7L8 435 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
RTN3-208ENST00000537981 FERMT2Q96AC1 680 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 TUBGCP2Q9BSJ2 902 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 PACSIN1Q9BY11 444 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 RAB17Q9H0T7 212 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 AZI2Q9H6S1 392 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 ETNK1Q9HBU6 452 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 NMRK1Q9NWW6 199 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 AMACRQ9UHK6 382 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 GFPT2O94808 682 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 RECKO95980 971 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 MAGEA1P43355 309 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 RHBDL3P58872 404 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 TAGLNQ01995 201 aaKnown RBP11.62□□□□□ -0.55
RTN3-208ENST00000537981 SPAG1Q07617 926 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 RCN2Q14257 317 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 CNPY1Q3B7I2 92 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 DUS1LQ6P1R4 473 aaKnown RBP11.62□□□□□ -0.55
RTN3-208ENST00000537981 PDXDC2PQ6P474 469 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 RIC3Q7Z5B4 369 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 USP38Q8NB14 1042 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 NRG4Q8WWG1 115 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 DNAJC9Q8WXX5 260 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 PLIN2Q99541 437 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 VRTNQ9H8Y1 702 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 EXOC1Q9NV70 894 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 SWAP70Q9UH65 585 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 ACEP12821 1306 aa11.62□□□□□ -0.55
RTN3-208ENST00000537981 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.61□□□□□ -0.55
RTN3-208ENST00000537981 ADAMTS3O15072 1205 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 ZBTB43O43298 467 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 PRDM1O75626 825 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 UBTFL6P0CB48 400 aaPredicted RBP11.61□□□□□ -0.55
RTN3-208ENST00000537981 RASA1P20936 1047 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 CACNA2D1P54289 1103 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 IGBP1P78318 339 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 Q4G0T1 1027 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 MIIPQ5JXC2 388 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 EXOC3L1Q86VI1 746 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 ASAP3Q8TDY4 903 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 NUDCD1Q96RS6 583 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 ZKSCAN3Q9BRR0 538 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 TRIM51Q9BSJ1 452 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 INTS9Q9NV88 658 aaKnown RBP11.61□□□□□ -0.55
RTN3-208ENST00000537981 ATXN10Q9UBB4 475 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 HSFX1Q9UBD0 423 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 UTYO14607 1347 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 LRRC53A6NM62 1247 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 TCP11X1B4DZS4 312 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 TTI1O43156 1089 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 FAM200BP0CF97 657 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 ZCCHC18P0CG32 403 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 KLRC1P26715 233 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 COPB2P35606 906 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 MMP13P45452 471 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 TCIRG1Q13488 830 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 DDB1Q16531 1140 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 IL17AQ16552 155 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 CGB2Q6NT52 195 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 FAM13CQ8NE31 585 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms