RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 RAB30Q15771 203 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 GRIK4Q16099 956 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 GALNT17Q6IS24 598 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 CNKSR3Q6P9H4 555 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 ABHD15Q6UXT9 468 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 PLPPR4Q7Z2D5 763 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 TBCKQ8TEA7 893 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 GTF3C6Q969F1 213 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 CDX2Q99626 313 aaPredicted RBP16.8■□□□□ 0.28
USP28-204ENST00000537642 ZNF577Q9BSK1 485 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 AZI2Q9H6S1 392 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 KCNJ14Q9UNX9 436 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 YBX2Q9Y2T7 364 aaKnown RBP16.8■□□□□ 0.28
USP28-204ENST00000537642 WDR81Q562E7 1941 aa16.8■□□□□ 0.28
USP28-204ENST00000537642 MYH9P35579 1960 aaKnown RBP16.79■□□□□ 0.28
USP28-204ENST00000537642 CAND2O75155 1236 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 BAIAP3O94812 1187 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 CTSHP09668 335 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 STAT5BP51692 787 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 PLCB4Q15147 1175 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 MARCH8Q5T0T0 291 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 RUFY4Q6ZNE9 571 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 PHF20Q9BVI0 1012 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 OSBPL7Q9BZF2 842 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 NKX2-4Q9H2Z4 354 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 ZNF576Q9H609 170 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 TBC1D22BQ9NU19 505 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 ORC3Q9UBD5 711 aaPredicted RBP16.79■□□□□ 0.28
USP28-204ENST00000537642 MSRAQ9UJ68 235 aa16.79■□□□□ 0.28
USP28-204ENST00000537642 MBLAC1A4D2B0 266 aaPredicted RBP16.78■□□□□ 0.28
USP28-204ENST00000537642 FDPSP14324 419 aaKnown RBP16.78■□□□□ 0.28
USP28-204ENST00000537642 INSRRP14616 1297 aa16.78■□□□□ 0.28
USP28-204ENST00000537642 MYOGP15173 224 aa16.78■□□□□ 0.28
USP28-204ENST00000537642 IGBP1P78318 339 aa16.78■□□□□ 0.28
USP28-204ENST00000537642 GRIN2CQ14957 1233 aa16.78■□□□□ 0.28
USP28-204ENST00000537642 CCDC60Q8IWA6 550 aaPredicted RBP16.78■□□□□ 0.28
USP28-204ENST00000537642 PHOSPHO2Q8TCD6 241 aa16.78■□□□□ 0.28
USP28-204ENST00000537642 SLC9A7Q96T83 725 aa16.78■□□□□ 0.28
USP28-204ENST00000537642 TUBE1Q9UJT0 475 aa16.78■□□□□ 0.28
USP28-204ENST00000537642 TRPC6Q9Y210 931 aa16.78■□□□□ 0.28
USP28-204ENST00000537642 PCDHA11Q9Y5I1 949 aa16.78■□□□□ 0.28
USP28-204ENST00000537642 SIP14410 1827 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 MICAL3Q7RTP6 2002 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 RRN3P2A6NIE6 340 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 BACH1O14867 736 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 MSH4O15457 936 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 WDR5P61964 334 aaKnown RBP16.77■□□□□ 0.28
USP28-204ENST00000537642 ST3GAL1Q11201 340 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 FAM26DQ5JW98 314 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 ZNF746Q6NUN9 644 aaPredicted RBP16.77■□□□□ 0.28
USP28-204ENST00000537642 MIS18BP1Q6P0N0 1132 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 TAF2Q6P1X5 1199 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 RPAINQ86UA6 219 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 NSUN7Q8NE18 718 aaKnown RBP16.77■□□□□ 0.28
USP28-204ENST00000537642 MYLIPQ8WY64 445 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 ZBTB10Q96DT7 871 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 KIF2CQ99661 725 aa16.77■□□□□ 0.28
USP28-204ENST00000537642 CYP3A7-CYP3A51PA0A087WV96 503 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 ABHD14A-ACY1A0A1B0GW23 586 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 POTEB3A0JP26 581 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 TDP2O95551 362 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 XBP1P17861 261 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 CYP3A7P24462 503 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 SLC26A2P50443 739 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 DEFB103AP81534 67 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 KRT76Q01546 638 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 NONOQ15233 471 aaKnown RBP eCLIP16.76■□□□□ 0.27
USP28-204ENST00000537642 Q4G0T1 1027 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 PLEKHG4Q58EX7 1191 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 FAM160B1Q5W0V3 765 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 SWSAP1Q6NVH7 229 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 POTEBQ6S5H4 581 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 KRT25Q7Z3Z0 450 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 HERC6Q8IVU3 1022 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 DBF4BQ8NFT6 615 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 OXER1Q8TDS5 423 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 TRAPPC12Q8WVT3 735 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 GJA10Q969M2 543 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 ZNF302Q9NR11 478 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 CHD9Q3L8U1 2897 aa16.76■□□□□ 0.27
USP28-204ENST00000537642 JAK2O60674 1132 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 CHRNA1P02708 482 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 ATP4AP20648 1035 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 KCNJ6P48051 423 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 MGAT3Q09327 533 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 IKBKEQ14164 716 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 INF2Q27J81 1249 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 PDXDC2PQ6P474 469 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
USP28-204ENST00000537642 ATP8B4Q8TF62 1192 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 DNAJB3Q8WWF6 145 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 WASF1Q92558 559 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 SLC5A5Q92911 643 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 TNPO1Q92973 898 aaKnown RBP16.75■□□□□ 0.27
USP28-204ENST00000537642 MBOAT7Q96N66 472 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 EVPLQ92817 2033 aa16.75■□□□□ 0.27
USP28-204ENST00000537642 HBP1O60381 514 aa16.74■□□□□ 0.27
USP28-204ENST00000537642 EFCAB14O75071 495 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms