RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PCDHA6Q9UN73 950 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 TELO2Q9Y4R8 837 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 PCDHA8Q9Y5H6 950 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.23□□□□□ -0.13
PRKDC-207ENST00000536483 SPDYE3A6NKU9 549 aa14.23□□□□□ -0.13
PRKDC-207ENST00000536483 SCG2P13521 617 aa14.23□□□□□ -0.13
PRKDC-207ENST00000536483 ITGB5P18084 799 aa14.23□□□□□ -0.13
PRKDC-207ENST00000536483 AP3B2Q13367 1082 aa14.23□□□□□ -0.13
PRKDC-207ENST00000536483 UTP14CQ5TAP6 766 aaKnown RBP14.23□□□□□ -0.13
PRKDC-207ENST00000536483 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
PRKDC-207ENST00000536483 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
PRKDC-207ENST00000536483 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
PRKDC-207ENST00000536483 CRYGNQ8WXF5 182 aa14.23□□□□□ -0.13
PRKDC-207ENST00000536483 SEPT8Q92599 483 aa14.23□□□□□ -0.13
PRKDC-207ENST00000536483 GPR20Q99678 358 aa14.23□□□□□ -0.13
PRKDC-207ENST00000536483 CD320Q9NPF0 282 aa14.23□□□□□ -0.13
PRKDC-207ENST00000536483 SMCO2A6NFE2 343 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 UPP2O95045 317 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 KCNA5P22460 613 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 NAPAP54920 295 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 SP4Q02446 784 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 UBE2SQ16763 222 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 EPC2Q52LR7 807 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 TMEM31Q5JXX7 168 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 TRIM50Q86XT4 487 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 TOP1MTQ969P6 601 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 YME1L1Q96TA2 773 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 EHMT1Q9H9B1 1298 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 JADE2Q9NQC1 790 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 SIP14410 1827 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 MICAL3Q7RTP6 2002 aa14.22□□□□□ -0.13
PRKDC-207ENST00000536483 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.21□□□□□ -0.13
PRKDC-207ENST00000536483 CAND2O75155 1236 aa14.21□□□□□ -0.13
PRKDC-207ENST00000536483 GNAT1P11488 350 aa14.21□□□□□ -0.13
PRKDC-207ENST00000536483 KCNA2P16389 499 aa14.21□□□□□ -0.13
PRKDC-207ENST00000536483 SREBF1P36956 1147 aa14.21□□□□□ -0.13
PRKDC-207ENST00000536483 ADCY7P51828 1080 aa14.21□□□□□ -0.13
PRKDC-207ENST00000536483 ARHGAP4P98171 946 aa14.21□□□□□ -0.13
PRKDC-207ENST00000536483 LEXMQ3ZCV2 418 aa14.21□□□□□ -0.13
PRKDC-207ENST00000536483 NIPA1Q7RTP0 329 aa14.21□□□□□ -0.13
PRKDC-207ENST00000536483 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.21□□□□□ -0.13
PRKDC-207ENST00000536483 CCDC12Q8WUD4 166 aaPredicted RBP14.21□□□□□ -0.13
PRKDC-207ENST00000536483 MRPL38Q96DV4 380 aaKnown RBP14.21□□□□□ -0.13
PRKDC-207ENST00000536483 SH3GLB2Q9NR46 395 aa14.21□□□□□ -0.13
PRKDC-207ENST00000536483 FAM86C2PA6NEL3 165 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 H3BNC9 293 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 MEIS1O00470 390 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 CYP3A4P08684 503 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 IL9P15248 144 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 ADAM17P78536 824 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 GPM6BQ13491 265 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 PTPROQ16827 1216 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 FAM178BQ8IXR5 827 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 LMBR1Q8WVP7 490 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 SAMD11Q96NU1 681 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 MXRA8Q9BRK3 442 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 UPF3BQ9BZI7 483 aaKnown RBP14.2□□□□□ -0.14
PRKDC-207ENST00000536483 C11orf16Q9NQ32 467 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 PDRG1Q9NUG6 133 aa14.2□□□□□ -0.14
PRKDC-207ENST00000536483 ZNF215Q9UL58 517 aaPredicted RBP14.2□□□□□ -0.14
PRKDC-207ENST00000536483 PI4K2BG5E9Z4 385 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 GPR37L1O60883 481 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 ATP9AO75110 1047 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 GNA11P29992 359 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 CEP55Q53EZ4 464 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 FAM26DQ5JW98 314 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 PTCRAQ6ISU1 281 aaPredicted RBP14.19□□□□□ -0.14
PRKDC-207ENST00000536483 TMEM192Q8IY95 271 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 GJD3Q8N144 294 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 APBB2Q92870 758 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 ANO3Q9BYT9 981 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 IFIH1Q9BYX4 1025 aaKnown RBP14.19□□□□□ -0.14
PRKDC-207ENST00000536483 C6orf50Q9HD87 102 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 HCN4Q9Y3Q4 1203 aa14.19□□□□□ -0.14
PRKDC-207ENST00000536483 DOCK5Q9H7D0 1870 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 NFASCO94856 1347 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 NRCAMQ92823 1304 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 H3BQ06 376 aaPredicted RBP14.18□□□□□ -0.14
PRKDC-207ENST00000536483 CHRNA1P02708 482 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 MTMR1Q13613 665 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 TIGD5Q53EQ6 642 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 TCEAL5Q5H9L2 206 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 BANK1Q8NDB2 785 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 BICD2Q8TD16 824 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 NEK9Q8TD19 979 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 PHKBQ93100 1093 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 NCOA5Q9HCD5 579 aaKnown RBP14.18□□□□□ -0.14
PRKDC-207ENST00000536483 KCNH7Q9NS40 1196 aa14.18□□□□□ -0.14
PRKDC-207ENST00000536483 NAP1L2Q9ULW6 460 aaPredicted RBP14.18□□□□□ -0.14
PRKDC-207ENST00000536483 MYO7AQ13402 2215 aa14.17□□□□□ -0.14
PRKDC-207ENST00000536483 GRXCR2A6NFK2 248 aa14.17□□□□□ -0.14
PRKDC-207ENST00000536483 GHRP10912 638 aa14.17□□□□□ -0.14
PRKDC-207ENST00000536483 SSTR3P32745 418 aaPredicted RBP14.17□□□□□ -0.14
PRKDC-207ENST00000536483 CIITAP33076 1130 aa14.17□□□□□ -0.14
PRKDC-207ENST00000536483 TCF7P36402 384 aaPredicted RBP14.17□□□□□ -0.14
PRKDC-207ENST00000536483 CCT2P78371 535 aaKnown RBP14.17□□□□□ -0.14
PRKDC-207ENST00000536483 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
PRKDC-207ENST00000536483 ANKRD1Q15327 319 aa14.17□□□□□ -0.14
PRKDC-207ENST00000536483 RUFY4Q6ZNE9 571 aa14.17□□□□□ -0.14
PRKDC-207ENST00000536483 EP400NLQ6ZTU2 488 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms