RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 ZNF302Q9NR11 478 aa25.11■■□□□ 1.61
VPS37C-202ENST00000535818 NRCAMQ92823 1304 aa25.11■■□□□ 1.61
VPS37C-202ENST00000535818 WDR64B1ANS9 1081 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 TREHO43280 583 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 MARCH6O60337 910 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 PSAPP07602 524 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 ACRP10323 421 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 SHHQ15465 462 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 CCDC60Q8IWA6 550 aaPredicted RBP25.1■■□□□ 1.61
VPS37C-202ENST00000535818 FBXO18Q8NFZ0 1043 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 AFAP1L1Q8TED9 768 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 LMBR1Q8WVP7 490 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 GJA10Q969M2 543 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 IL23AQ9NPF7 189 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 PCDHA10Q9Y5I2 948 aa25.1■■□□□ 1.61
VPS37C-202ENST00000535818 TANC1Q9C0D5 1861 aa25.09■■□□□ 1.61
VPS37C-202ENST00000535818 IGKV6D-21A0A0A0MT36 114 aa25.09■■□□□ 1.61
VPS37C-202ENST00000535818 HOXC8P31273 242 aa25.09■■□□□ 1.61
VPS37C-202ENST00000535818 SLC26A2P50443 739 aa25.09■■□□□ 1.61
VPS37C-202ENST00000535818 GRIK4Q16099 956 aa25.09■■□□□ 1.61
VPS37C-202ENST00000535818 SWSAP1Q6NVH7 229 aa25.09■■□□□ 1.61
VPS37C-202ENST00000535818 PDXDC2PQ6P474 469 aa25.09■■□□□ 1.61
VPS37C-202ENST00000535818 PSRC1Q6PGN9 363 aaPredicted RBP25.09■■□□□ 1.61
VPS37C-202ENST00000535818 SERINC5Q86VE9 423 aa25.09■■□□□ 1.61
VPS37C-202ENST00000535818 RPUSD2Q8IZ73 545 aaKnown RBP25.09■■□□□ 1.61
VPS37C-202ENST00000535818 ETNPPLQ8TBG4 499 aa25.09■■□□□ 1.61
VPS37C-202ENST00000535818 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.09■■□□□ 1.61
VPS37C-202ENST00000535818 TRIP12Q14669 1992 aaPredicted RBP25.08■■□□□ 1.61
VPS37C-202ENST00000535818 PSMD10O75832 226 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 IQCF3P0C7M6 154 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 JAK3P52333 1124 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 IGBP1P78318 339 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 PLCB4Q15147 1175 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 LRRC8DQ7L1W4 858 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 CKAP2LQ8IYA6 745 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 RNPC3Q96LT9 517 aaKnown RBP25.08■■□□□ 1.61
VPS37C-202ENST00000535818 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.08■■□□□ 1.61
VPS37C-202ENST00000535818 UNC45AQ9H3U1 944 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 DISC1Q9NRI5 854 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 SMC3Q9UQE7 1217 aa25.08■■□□□ 1.61
VPS37C-202ENST00000535818 TRIOBPQ9H2D6 2365 aa25.08■■□□□ 1.6
VPS37C-202ENST00000535818 KAT6AQ92794 2004 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 POTEB3A0JP26 581 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 CKBP12277 381 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 SELPP16109 830 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 GJB2P29033 226 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 SFNP31947 248 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 RFC2P35250 354 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 RBL2Q08999 1139 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 POTEBQ6S5H4 581 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 MIER3Q7Z3K6 550 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 DEFB128Q7Z7B8 93 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 POTEDQ86YR6 584 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 WNT8BQ93098 351 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 FAM20AQ96MK3 541 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 FOXP1Q9H334 677 aaPredicted RBP25.07■■□□□ 1.6
VPS37C-202ENST00000535818 GABBR1Q9UBS5 961 aa25.07■■□□□ 1.6
VPS37C-202ENST00000535818 RRN3P2A6NIE6 340 aa25.06■■□□□ 1.6
VPS37C-202ENST00000535818 INSRRP14616 1297 aa25.06■■□□□ 1.6
VPS37C-202ENST00000535818 THPOP40225 353 aa25.06■■□□□ 1.6
VPS37C-202ENST00000535818 TMEM240Q5SV17 173 aa25.06■■□□□ 1.6
VPS37C-202ENST00000535818 ZNF365Q70YC5 407 aa25.06■■□□□ 1.6
VPS37C-202ENST00000535818 KCNMB3Q9NPA1 279 aa25.06■■□□□ 1.6
VPS37C-202ENST00000535818 TUBE1Q9UJT0 475 aa25.06■■□□□ 1.6
VPS37C-202ENST00000535818 TBX3O15119 743 aa25.05■■□□□ 1.6
VPS37C-202ENST00000535818 BAG4O95429 457 aaKnown RBP25.05■■□□□ 1.6
VPS37C-202ENST00000535818 PFKMP08237 780 aa25.05■■□□□ 1.6
VPS37C-202ENST00000535818 ATP2B1P20020 1258 aa25.05■■□□□ 1.6
VPS37C-202ENST00000535818 ADAM17P78536 824 aa25.05■■□□□ 1.6
VPS37C-202ENST00000535818 TRIM71Q2Q1W2 868 aaKnown RBP25.05■■□□□ 1.6
VPS37C-202ENST00000535818 LRIT3Q3SXY7 679 aa25.05■■□□□ 1.6
VPS37C-202ENST00000535818 C16orf59Q7L2K0 433 aa25.05■■□□□ 1.6
VPS37C-202ENST00000535818 RDM1Q8NG50 284 aa25.05■■□□□ 1.6
VPS37C-202ENST00000535818 ATP8B4Q8TF62 1192 aa25.05■■□□□ 1.6
VPS37C-202ENST00000535818 HBP1O60381 514 aa25.04■■□□□ 1.6
VPS37C-202ENST00000535818 FGBP02675 491 aa25.04■■□□□ 1.6
VPS37C-202ENST00000535818 FXR1P51114 621 aaKnown RBP eCLIP25.04■■□□□ 1.6
VPS37C-202ENST00000535818 ZNF618Q5T7W0 954 aa25.04■■□□□ 1.6
VPS37C-202ENST00000535818 TRMT1LQ7Z2T5 733 aaKnown RBP25.04■■□□□ 1.6
VPS37C-202ENST00000535818 FTOQ9C0B1 505 aaKnown RBP eCLIP25.04■■□□□ 1.6
VPS37C-202ENST00000535818 MTIF3Q9H2K0 278 aaKnown RBP25.04■■□□□ 1.6
VPS37C-202ENST00000535818 MAFBQ9Y5Q3 323 aaPredicted RBP25.04■■□□□ 1.6
VPS37C-202ENST00000535818 SCN5AQ14524 2016 aa25.03■■□□□ 1.6
VPS37C-202ENST00000535818 H3BQV1 296 aa25.03■■□□□ 1.6
VPS37C-202ENST00000535818 NEMFO60524 1076 aa25.03■■□□□ 1.6
VPS37C-202ENST00000535818 PARNO95453 639 aaKnown RBP25.03■■□□□ 1.6
VPS37C-202ENST00000535818 TAF2Q6P1X5 1199 aa25.03■■□□□ 1.6
VPS37C-202ENST00000535818 NOSTRINQ8IVI9 506 aa25.03■■□□□ 1.6
VPS37C-202ENST00000535818 SLFN12Q8IYM2 578 aa25.03■■□□□ 1.6
VPS37C-202ENST00000535818 IGSF9BQ9UPX0 1349 aa25.03■■□□□ 1.6
VPS37C-202ENST00000535818 MYH9P35579 1960 aaKnown RBP25.02■■□□□ 1.6
VPS37C-202ENST00000535818 CAND2O75155 1236 aa25.02■■□□□ 1.6
VPS37C-202ENST00000535818 CTSHP09668 335 aa25.02■■□□□ 1.6
VPS37C-202ENST00000535818 CALCRLQ16602 461 aa25.02■■□□□ 1.6
VPS37C-202ENST00000535818 OTOP2Q7RTS6 562 aa25.02■■□□□ 1.6
VPS37C-202ENST00000535818 RSPH3Q86UC2 560 aa25.02■■□□□ 1.6
VPS37C-202ENST00000535818 TRAPPC12Q8WVT3 735 aa25.02■■□□□ 1.6
VPS37C-202ENST00000535818 BBXQ8WY36 941 aaPredicted RBP25.02■■□□□ 1.6
VPS37C-202ENST00000535818 FAM167AQ96KS9 214 aa25.02■■□□□ 1.6
VPS37C-202ENST00000535818 NOL7Q9UMY1 257 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms