RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 PCDH11YQ9BZA8 1340 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 WNK3Q9BYP7 1800 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 DISP2A7MBM2 1401 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RBM47A0AV96 593 aaKnown RBP6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CHURC1-FNTBB4DL54 471 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GRIN3BO60391 1043 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 INHBBP09529 407 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 EXOSC10Q01780 885 aaKnown RBP6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 KRT32Q14532 448 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CHRNA2Q15822 529 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CLEC16AQ2KHT3 1053 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 BLOC1S2Q6QNY1 142 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 STOX1Q6ZVD7 989 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 UBE3BQ7Z3V4 1068 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TMC4Q7Z404 712 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PHACTR4Q8IZ21 702 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TTC5Q8N0Z6 440 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ANKS4BQ8N8V4 417 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 NECAB1Q8N987 351 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 KBTBD3Q8NAB2 608 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CCDC191Q8NCU4 936 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GTF3C6Q969F1 213 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 EDC3Q96F86 508 aaKnown RBP6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CRELD1Q96HD1 420 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RHOVQ96L33 236 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 FAM161BQ96MY7 647 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PLA2G12BQ9BX93 195 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MCOLN1Q9GZU1 580 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SIL1Q9H173 461 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 HELLSQ9NRZ9 838 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GPR160Q9UJ42 338 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 YBX2Q9Y2T7 364 aaKnown RBP6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CICQ96RK0 1608 aaPredicted RBP6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SALL1Q9NSC2 1324 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ARAP2Q8WZ64 1704 aa6.96□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ABCC12Q96J65 1359 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 A0A087WZG4 1122 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SHISA3A0PJX4 238 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PEX10O60683 326 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SEMA7AO75326 666 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 HTR3BO95264 441 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TPM2P07951 284 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CYP21A2P08686 494 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PDCP20941 246 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GBP2P32456 591 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PDE6BP35913 854 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 IL15P40933 162 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 EVCP57679 992 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CHMP4BP1P59074 171 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 DLG4P78352 724 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TEKQ02763 1124 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RESTQ13127 1097 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SNX17Q15036 470 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MCMDC2Q4G0Z9 681 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 LMBR1LQ6UX01 489 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TTLL7Q6ZT98 887 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RELL1Q8IUW5 271 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ZCRB1Q8TBF4 217 aaKnown RBP6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ANP32BQ92688 251 aaKnown RBP6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 LLPHQ9BRT6 129 aaKnown RBP6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 DSCC1Q9BVC3 393 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 IRF2BPLQ9H1B7 796 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CWC25Q9NXE8 425 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RREB1Q92766 1687 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MYH3P11055 1940 aa6.95□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RIC1Q4ADV7 1423 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 C4AP0C0L4 1744 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 C4BP0C0L5 1744 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MYOCOSA0A1B0GUC4 107 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 EYA2O00167 538 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 FOXP2O15409 715 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PFKFB2O60825 505 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CHGBP05060 677 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CSF1RP07333 972 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PIP4K2AP48426 406 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TMEM74Q96NL1 305 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SEC62Q99442 399 aaKnown RBP6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ASCC2Q9H1I8 757 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 NCANO14594 1321 aa6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 COL22A1Q8NFW1 1626 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ATRNO75882 1429 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 DOCK2Q92608 1830 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 B8ZZF3 427 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PRRG2O14669 202 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 AP5Z1O43299 807 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 FIBPO43427 364 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CTDNEP1O95476 244 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 A1BGP04217 495 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GBP1P32455 592 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 KRT85P78386 507 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 FAM160A1Q05DH4 1040 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PWP1Q13610 501 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SNAP47Q5SQN1 464 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 LARP1BQ659C4 914 aaKnown RBP6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CCDC129Q6ZRS4 1044 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RGS22Q8NE09 1264 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 LEO1Q8WVC0 666 aaPredicted RBP6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 NEK1Q96PY6 1258 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RSRP1Q9BUV0 290 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms