RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 NAALADL2Q58DX5 795 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 LMBR1Q8WVP7 490 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 GPKOWQ92917 476 aaPredicted RBP eCLIP11.82□□□□□ -0.521e-7■□□□□ 10.5
CSDE1-217ENST00000534699 WDR81Q562E7 1941 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 CYP3A7-CYP3A51PA0A087WV96 503 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 M0QZ92 97 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 TLL1O43897 1013 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 RB1P06400 928 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 RXRAP19793 462 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 CYP3A7P24462 503 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 STAT5BP51692 787 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 ACTR2P61160 394 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 PLA2G4DQ86XP0 818 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 PIBF1Q8WXW3 757 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 TGS1Q96RS0 853 aaKnown RBP11.82□□□□□ -0.52
CSDE1-217ENST00000534699 MAGEB2O15479 319 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 DKC1O60832 514 aaKnown RBP eCLIP11.81□□□□□ -0.52
CSDE1-217ENST00000534699 ATP9AO75110 1047 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 TAP1Q03518 808 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 UTP14CQ5TAP6 766 aaKnown RBP11.81□□□□□ -0.52
CSDE1-217ENST00000534699 ABHD15Q6UXT9 468 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 EXOC8Q8IYI6 725 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
CSDE1-217ENST00000534699 GLG1Q92896 1179 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 TUBE1Q9UJT0 475 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 IGLV3-22A0A075B6J6 115 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 TREHO43280 583 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 NCK2O43639 380 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
CSDE1-217ENST00000534699 PSAPP07602 524 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 ADD1P35611 737 aaKnown RBP11.81□□□□□ -0.52
CSDE1-217ENST00000534699 PBX2P40425 430 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 JAK3P52333 1124 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 Q4G0T1 1027 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 TJAP1Q5JTD0 557 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 TSHZ1Q6ZSZ6 1077 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 ATP8B4Q8TF62 1192 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 MBOAT7Q96N66 472 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 THEGQ9P2T0 379 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 TRPV2Q9Y5S1 764 aa11.81□□□□□ -0.52
CSDE1-217ENST00000534699 COL4A4P53420 1690 aaPredicted RBP11.81□□□□□ -0.52
CSDE1-217ENST00000534699 GCFC2P16383 781 aaKnown RBP11.8□□□□□ -0.52
CSDE1-217ENST00000534699 MRPS6P82932 125 aaKnown RBP11.8□□□□□ -0.52
CSDE1-217ENST00000534699 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
CSDE1-217ENST00000534699 KRT25Q7Z3Z0 450 aa11.8□□□□□ -0.52
CSDE1-217ENST00000534699 TOP1MTQ969P6 601 aa11.8□□□□□ -0.52
CSDE1-217ENST00000534699 PCDHA4Q9UN74 947 aa11.8□□□□□ -0.52
CSDE1-217ENST00000534699 GRXCR1A8MXD5 290 aa11.8□□□□□ -0.52
CSDE1-217ENST00000534699 PUS10Q3MIT2 529 aaKnown RBP11.8□□□□□ -0.52
CSDE1-217ENST00000534699 CMTR1Q8N1G2 835 aaKnown RBP11.8□□□□□ -0.52
CSDE1-217ENST00000534699 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
CSDE1-217ENST00000534699 C1orf112Q9NSG2 853 aa11.8□□□□□ -0.52
CSDE1-217ENST00000534699 SETD4Q9NVD3 440 aa11.8□□□□□ -0.52
CSDE1-217ENST00000534699 MAFBQ9Y5Q3 323 aaPredicted RBP11.8□□□□□ -0.52
CSDE1-217ENST00000534699 NLRC5Q86WI3 1866 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 FSD2A1L4K1 749 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 IPO5O00410 1097 aaKnown RBP11.79□□□□□ -0.52
CSDE1-217ENST00000534699 DLL1O00548 723 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 CPLX1O14810 134 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 STAG3L1P0CL83 205 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 TOB2Q14106 344 aaPredicted RBP11.79□□□□□ -0.52
CSDE1-217ENST00000534699 HIC1Q14526 733 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 MBTPS1Q14703 1052 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 PLCB4Q15147 1175 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 PTPROQ16827 1216 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 PCYT2Q99447 389 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 PLVAPQ9BX97 442 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 PDRG1Q9NUG6 133 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 PCDHA10Q9Y5I2 948 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 TET1Q8NFU7 2136 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 POTEB3A0JP26 581 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 TBX3O15119 743 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 DHX15O43143 795 aaKnown RBP11.79□□□□□ -0.52
CSDE1-217ENST00000534699 MRPS5P82675 430 aaKnown RBP11.79□□□□□ -0.52
CSDE1-217ENST00000534699 POTEBQ6S5H4 581 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 CCDC82Q8N4S0 544 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 DBF4BQ8NFT6 615 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 ZNF577Q9BSK1 485 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 PRDM12Q9H4Q4 367 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 ZNF302Q9NR11 478 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 NRBP2Q9NSY0 501 aa11.79□□□□□ -0.52
CSDE1-217ENST00000534699 WDR64B1ANS9 1081 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 C5orf67F2Z3F1 127 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 PFKFB2O60825 505 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 CA3P07451 260 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 ARP10275 920 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 JPH2Q9BR39 696 aaPredicted RBP11.78□□□□□ -0.52
CSDE1-217ENST00000534699 INSRRP14616 1297 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 NLRP5P59047 1200 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 CHMP4BP1P59074 171 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 ZNF200P98182 395 aaPredicted RBP11.78□□□□□ -0.52
CSDE1-217ENST00000534699 ITGB3BPQ13352 177 aaPredicted RBP11.78□□□□□ -0.52
CSDE1-217ENST00000534699 FBXO47Q5MNV8 452 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 MARCH8Q5T0T0 291 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 CMTR2Q8IYT2 770 aaKnown RBP11.78□□□□□ -0.52
CSDE1-217ENST00000534699 WNT8BQ93098 351 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 FAM161BQ96MY7 647 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 SLC26A6Q9BXS9 759 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms