RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 HIP1RO75146 1068 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 POU3F3P20264 500 aaPredicted RBP9.03□□□□□ -0.96
CASP4-213ENST00000534356 STRN3Q13033 797 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 SSPNQ14714 243 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 TMEM132BQ14DG7 1078 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 DHCR24Q15392 516 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 AFAP1L2Q8N4X5 818 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 SMC1BQ8NDV3 1235 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 NOX5Q96PH1 765 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 EPB41L4AQ9HCS5 686 aaPredicted RBP9.03□□□□□ -0.96
CASP4-213ENST00000534356 OXSMQ9NWU1 459 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 IRAK3Q9Y616 596 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 TCAF2A6NFQ2 919 aa9.02□□□□□ -0.97
CASP4-213ENST00000534356 H7C1D1 291 aa9.02□□□□□ -0.97
CASP4-213ENST00000534356 CD276Q5ZPR3 534 aa9.02□□□□□ -0.97
CASP4-213ENST00000534356 LIPIQ6XZB0 460 aa9.02□□□□□ -0.97
CASP4-213ENST00000534356 STK32CQ86UX6 486 aa9.02□□□□□ -0.97
CASP4-213ENST00000534356 GPR101Q96P66 508 aaPredicted RBP9.02□□□□□ -0.97
CASP4-213ENST00000534356 GORASP1Q9BQQ3 440 aa9.02□□□□□ -0.97
CASP4-213ENST00000534356 SMG5Q9UPR3 1016 aaKnown RBP9.02□□□□□ -0.97
CASP4-213ENST00000534356 SLC9A1P19634 815 aa9.01□□□□□ -0.97
CASP4-213ENST00000534356 ADCYAP1R1P41586 468 aa9.01□□□□□ -0.97
CASP4-213ENST00000534356 KIF11P52732 1056 aa9.01□□□□□ -0.97
CASP4-213ENST00000534356 NFKB2Q00653 900 aa9.01□□□□□ -0.97
CASP4-213ENST00000534356 DBPQ10586 325 aaPredicted RBP9.01□□□□□ -0.97
CASP4-213ENST00000534356 SART3Q15020 963 aaKnown RBP9.01□□□□□ -0.97
CASP4-213ENST00000534356 TMC5Q6UXY8 1006 aa9.01□□□□□ -0.97
CASP4-213ENST00000534356 KIAA1958Q8N8K9 716 aa9.01□□□□□ -0.97
CASP4-213ENST00000534356 KRTAP4-12Q9BQ66 201 aa9.01□□□□□ -0.97
CASP4-213ENST00000534356 CD320Q9NPF0 282 aa9.01□□□□□ -0.97
CASP4-213ENST00000534356 RASSF10A6NK89 507 aa9□□□□□ -0.97
CASP4-213ENST00000534356 TSPAN15O95858 294 aa9□□□□□ -0.97
CASP4-213ENST00000534356 BPIP17213 487 aa9□□□□□ -0.97
CASP4-213ENST00000534356 PI3P19957 117 aa9□□□□□ -0.97
CASP4-213ENST00000534356 THBS2P35442 1172 aa9□□□□□ -0.97
CASP4-213ENST00000534356 IL2P60568 153 aa9□□□□□ -0.97
CASP4-213ENST00000534356 CC2D1AQ6P1N0 951 aaPredicted RBP9□□□□□ -0.97
CASP4-213ENST00000534356 FAM129CQ86XR2 697 aa9□□□□□ -0.97
CASP4-213ENST00000534356 BHLHE22Q8NFJ8 381 aaPredicted RBP9□□□□□ -0.97
CASP4-213ENST00000534356 USP7Q93009 1102 aa9□□□□□ -0.97
CASP4-213ENST00000534356 SPTLC3Q9NUV7 552 aa9□□□□□ -0.97
CASP4-213ENST00000534356 CNOT6Q9ULM6 557 aaKnown RBP9□□□□□ -0.97
CASP4-213ENST00000534356 KCTD3Q9Y597 815 aa9□□□□□ -0.97
CASP4-213ENST00000534356 ZCCHC6Q5VYS8 1495 aaKnown RBP9□□□□□ -0.97
CASP4-213ENST00000534356 FKBP9O95302 570 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 PLA2G1BP04054 148 aaKnown RBP8.99□□□□□ -0.97
CASP4-213ENST00000534356 MMEP08473 750 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 SDHAP31040 664 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 ID4P47928 161 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 ITGA1P56199 1179 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 HERVK_113P62684 666 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 AMPD3Q01432 767 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 ZNF174Q15697 407 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 ZNF124Q15973 351 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 CATSPEREQ5SY80 951 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 FKBP9P1Q75LS8 142 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 GPATCH3Q96I76 525 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 ELF4Q99607 663 aaPredicted RBP8.99□□□□□ -0.97
CASP4-213ENST00000534356 C11orf84Q9BUA3 381 aaPredicted RBP8.99□□□□□ -0.97
CASP4-213ENST00000534356 PCIF1Q9H4Z3 704 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 SLC39A2Q9NP94 309 aa8.99□□□□□ -0.97
CASP4-213ENST00000534356 NEMP1O14524 444 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 FOXP2O15409 715 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 EYA4O95677 639 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 ENO2P09104 434 aaPredicted RBP8.98□□□□□ -0.97
CASP4-213ENST00000534356 PTX3P26022 381 aaPredicted RBP8.98□□□□□ -0.97
CASP4-213ENST00000534356 LSSP48449 732 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 KPNA1P52294 538 aaPredicted RBP8.98□□□□□ -0.97
CASP4-213ENST00000534356 PFKPQ01813 784 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 VASNQ6EMK4 673 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 CNKSR3Q6P9H4 555 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 LINC00482Q8N8I6 264 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 ASB15Q8WXK1 588 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 PCDH18Q9HCL0 1135 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 BTBD7Q9P203 1132 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 SPO11Q9Y5K1 396 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 COL4A3BPQ9Y5P4 624 aa8.98□□□□□ -0.97
CASP4-213ENST00000534356 ZNF839A8K0R7 811 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 TGM5O43548 720 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 RAP1GAPP47736 663 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 HTRA3P83110 453 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 ADAM9Q13443 819 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 SMAD4Q13485 552 aaKnown RBP8.97□□□□□ -0.97
CASP4-213ENST00000534356 PTPROQ16827 1216 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 EFHBQ8N7U6 833 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 ZBTB8AQ96BR9 441 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 GBP4Q96PP9 640 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 TTC1Q99614 292 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 IFT22Q9H7X7 185 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 PCDH12Q9NPG4 1184 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 ACSS2Q9NR19 701 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 PMF1-BGLAPU3KQ54 211 aa8.97□□□□□ -0.97
CASP4-213ENST00000534356 NPIPB6E9PJ23 425 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 AOAHP28039 575 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 MC4RP32245 332 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 TXKP42681 527 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 LINC00310P59036 64 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 KCNA10Q16322 511 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 PKN1Q16512 942 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 PHF19Q5T6S3 580 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms