RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 CCDC43Q96MW1 224 aaKnown RBP18.97■□□□□ 0.63
SIPA1-209ENST00000534313 TULP1O00294 542 aaPredicted RBP18.97■□□□□ 0.63
SIPA1-209ENST00000534313 MYBP10242 640 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 RBM5P52756 815 aaKnown RBP eCLIP18.97■□□□□ 0.63
SIPA1-209ENST00000534313 EPHB4P54760 987 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 PTK2Q05397 1052 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 KCNA1Q09470 495 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 ZIM3Q96PE6 472 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 SPAG5Q96R06 1193 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 HDAC9Q9UKV0 1011 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 HOXA13P31271 388 aaPredicted RBP18.97■□□□□ 0.63
SIPA1-209ENST00000534313 GNGT1P63211 74 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 SLC18A3Q16572 532 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 RNF187Q5TA31 235 aaPredicted RBP18.97■□□□□ 0.63
SIPA1-209ENST00000534313 CYP2W1Q8TAV3 490 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 DNAJC18Q9H819 358 aa18.97■□□□□ 0.63
SIPA1-209ENST00000534313 PPEF1O14829 653 aaPredicted RBP18.96■□□□□ 0.63
SIPA1-209ENST00000534313 GDF11O95390 407 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 IRAK1P51617 712 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 SAMD1Q6SPF0 538 aaPredicted RBP18.96■□□□□ 0.63
SIPA1-209ENST00000534313 KIAA0825Q8IV33 1275 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 CERKQ8TCT0 537 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 DHX36Q9H2U1 1008 aaKnown RBP18.96■□□□□ 0.63
SIPA1-209ENST00000534313 SRCAPQ6ZRS2 3230 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 MYH7BA7E2Y1 1941 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 KCNK3O14649 394 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 CETN3O15182 167 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 HSF2BPO75031 334 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 RPS6KA5O75582 802 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 NAB2Q15742 525 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 GPATCH4Q5T3I0 446 aaKnown RBP18.96■□□□□ 0.63
SIPA1-209ENST00000534313 DBNDD1Q9H9R9 158 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 ATF5Q9Y2D1 282 aaPredicted RBP18.96■□□□□ 0.63
SIPA1-209ENST00000534313 GRID2IPA4D2P6 1211 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 PPFIA4O75335 1185 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 HLA-DOAP06340 250 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 CASP4P49662 377 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 REEP2Q9BRK0 252 aa18.96■□□□□ 0.63
SIPA1-209ENST00000534313 ZNF219Q9P2Y4 722 aaPredicted RBP18.96■□□□□ 0.63
SIPA1-209ENST00000534313 KDM3AQ9Y4C1 1321 aa18.96■□□□□ 0.62
SIPA1-209ENST00000534313 SLFN13Q68D06 897 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 CAPS2Q9BXY5 557 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 SLC12A3P55017 1021 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 SEPT2Q15019 361 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 ZNF572Q7Z3I7 529 aaPredicted RBP18.95■□□□□ 0.62
SIPA1-209ENST00000534313 ZNF571Q7Z3V5 609 aaPredicted RBP18.95■□□□□ 0.62
SIPA1-209ENST00000534313 CEP63Q96MT8 703 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 GANQ9H2C0 597 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 ARHGAP4P98171 946 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 PDCLQ13371 301 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 RNF10Q8N5U6 811 aaKnown RBP18.95■□□□□ 0.62
SIPA1-209ENST00000534313 AP1M1Q9BXS5 423 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 AJAP1Q9UKB5 411 aaPredicted RBP18.95■□□□□ 0.62
SIPA1-209ENST00000534313 PCDHB13Q9Y5F0 798 aa18.95■□□□□ 0.62
SIPA1-209ENST00000534313 PLIN4Q96Q06 1357 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 DDTLA6NHG4 134 aaPredicted RBP18.94■□□□□ 0.62
SIPA1-209ENST00000534313 PPP1R18Q6NYC8 613 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 KSR1Q8IVT5 923 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 CASKIN2Q8WXE0 1202 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 RBAK-RBAKDNI3L0D1 243 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 GCFC2P16383 781 aaKnown RBP18.94■□□□□ 0.62
SIPA1-209ENST00000534313 APOBEC3HQ6NTF7 200 aaKnown RBP18.94■□□□□ 0.62
SIPA1-209ENST00000534313 SPICE1Q8N0Z3 855 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 RGL1Q9NZL6 768 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 MEIS2O14770 477 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 POLD1P28340 1107 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 ITIH3Q06033 890 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 GIT2Q14161 759 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 EDEM3Q9BZQ6 932 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 BHMT2Q9H2M3 363 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 KCNMB3Q9NPA1 279 aa18.94■□□□□ 0.62
SIPA1-209ENST00000534313 ARMCX3Q9UH62 379 aaPredicted RBP18.94■□□□□ 0.62
SIPA1-209ENST00000534313 FAM86B1E9PN63 330 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 RAD51CO43502 376 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 FAM86B2P0C5J1 330 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 HOXD13P35453 343 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 DDX42Q86XP3 938 aaKnown RBP eCLIP18.93■□□□□ 0.62
SIPA1-209ENST00000534313 IFT20Q8IY31 132 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 PIGOQ8TEQ8 1089 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 TMCO5BA8MYB1 307 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 CEP104O60308 925 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 AKAP3O75969 853 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 HLTFQ14527 1009 aaKnown RBP eCLIP18.93■□□□□ 0.62
SIPA1-209ENST00000534313 MEI1Q5TIA1 1274 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 EMBQ6PCB8 327 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 TADA2BQ86TJ2 420 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 LUC7LQ9NQ29 371 aaKnown RBP18.93■□□□□ 0.62
SIPA1-209ENST00000534313 SWAP70Q9UH65 585 aa18.93■□□□□ 0.62
SIPA1-209ENST00000534313 NDUFAB1O14561 156 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 CHMP2AO43633 222 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 GCNT3O95395 438 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 UCHL3P15374 230 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 RBM46Q8TBY0 533 aaKnown RBP18.92■□□□□ 0.62
SIPA1-209ENST00000534313 COA1Q9GZY4 146 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 ZBTB39O15060 712 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 GNA14O95837 355 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 INPP5BP32019 993 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 HYIQ5T013 277 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 CFAP58Q5T655 872 aa18.92■□□□□ 0.62
SIPA1-209ENST00000534313 TAF4BQ92750 862 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms