RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 LONP1P36776 959 aaKnown RBP15.82■□□□□ 0.12
CMTM1-218ENST00000533915 CSPP1Q1MSJ5 1256 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 KRT79Q5XKE5 535 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 SWSAP1Q6NVH7 229 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 B3GNT9Q6UX72 402 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 CKAP2LQ8IYA6 745 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 KRI1Q8N9T8 703 aaKnown RBP15.82■□□□□ 0.12
CMTM1-218ENST00000533915 LINC00301Q8NCQ3 95 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 AFAP1L1Q8TED9 768 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 FAM167AQ96KS9 214 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 TUT1Q9H6E5 874 aaKnown RBP15.82■□□□□ 0.12
CMTM1-218ENST00000533915 KAT6AQ92794 2004 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 IGKV6D-21A0A0A0MT36 114 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 A0A0U1RQG5 324 aaPredicted RBP15.81■□□□□ 0.12
CMTM1-218ENST00000533915 SLC26A4O43511 780 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 ZNF286BP0CG31 522 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 TXLNAP40222 546 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 QARSP47897 775 aaKnown RBP15.81■□□□□ 0.12
CMTM1-218ENST00000533915 PSEN2P49810 448 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 PSMC5P62195 406 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 SPIRE1Q08AE8 756 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 MFSD10Q14728 455 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 PTPAQ15257 358 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 C7orf31Q8N865 590 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 IGSF22Q8N9C0 903 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 PAWRQ96IZ0 340 aaKnown RBP15.81■□□□□ 0.12
CMTM1-218ENST00000533915 SPATA32Q96LK8 384 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 SENP6Q9GZR1 1112 aaPredicted RBP15.81■□□□□ 0.12
CMTM1-218ENST00000533915 NRBP2Q9NSY0 501 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 GABBR1Q9UBS5 961 aa15.81■□□□□ 0.12
CMTM1-218ENST00000533915 SRPRBQ9Y5M8 271 aaKnown RBP15.81■□□□□ 0.12
CMTM1-218ENST00000533915 MROH7Q68CQ1 1323 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 GNAT1P11488 350 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 MUTP22033 750 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 MARCKSP29966 332 aaPredicted RBP15.8■□□□□ 0.12
CMTM1-218ENST00000533915 UBA7P41226 1012 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 ME1P48163 572 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 SOX10P56693 466 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 CHMP4BP1P59074 171 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 IRX5P78411 483 aaPredicted RBP15.8■□□□□ 0.12
CMTM1-218ENST00000533915 PTPN11Q06124 597 aaPredicted RBP15.8■□□□□ 0.12
CMTM1-218ENST00000533915 KIAA0753Q2KHM9 967 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 NFRKBQ6P4R8 1299 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 EIF2AK1Q9BQI3 630 aaKnown RBP15.8■□□□□ 0.12
CMTM1-218ENST00000533915 C16orf70Q9BSU1 422 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 FTOQ9C0B1 505 aaKnown RBP eCLIP15.8■□□□□ 0.12
CMTM1-218ENST00000533915 ZSWIM4Q9H7M6 989 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 TUFT1Q9NNX1 390 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 RCOR1Q9UKL0 485 aa15.8■□□□□ 0.12
CMTM1-218ENST00000533915 MAFBQ9Y5Q3 323 aaPredicted RBP15.8■□□□□ 0.12
CMTM1-218ENST00000533915 KDM3AQ9Y4C1 1321 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 SCN10AQ9Y5Y9 1956 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 POTEMA6NI47 508 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 EML1O00423 815 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 COL6A1P12109 1028 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 ITGA7Q13683 1181 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 OTUD6AQ7L8S5 288 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 CCDC60Q8IWA6 550 aaPredicted RBP15.79■□□□□ 0.12
CMTM1-218ENST00000533915 TPH2Q8IWU9 490 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 KCTD17Q8N5Z5 321 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 RASSF8Q8NHQ8 419 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 CDK5RAP3Q96JB5 506 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 POLR3CQ9BUI4 534 aaPredicted RBP15.79■□□□□ 0.12
CMTM1-218ENST00000533915 TRPC6Q9Y210 931 aa15.79■□□□□ 0.12
CMTM1-218ENST00000533915 TCHHQ07283 1943 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 IGSF9BQ9UPX0 1349 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 BRCA2P51587 3418 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 POTEB3A0JP26 581 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 ARVCFO00192 962 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 HBP1O60381 514 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 CUTAO60888 179 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 RPA1P27694 616 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 CCT6AP40227 531 aaKnown RBP15.78■□□□□ 0.12
CMTM1-218ENST00000533915 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
CMTM1-218ENST00000533915 NBPF20Q3BBV1 942 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 XKR3Q5GH77 459 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 FAM47CQ5HY64 1035 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 POTEBQ6S5H4 581 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 TRIM50Q86XT4 487 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 EXOC8Q8IYI6 725 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
CMTM1-218ENST00000533915 SNX29Q8TEQ0 813 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 ATP8B4Q8TF62 1192 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 BBXQ8WY36 941 aaPredicted RBP15.78■□□□□ 0.12
CMTM1-218ENST00000533915 KAT2BQ92831 832 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 CALML4Q96GE6 196 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 CCDC43Q96MW1 224 aaKnown RBP15.78■□□□□ 0.12
CMTM1-218ENST00000533915 HSD17B14Q9BPX1 270 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 LXNQ9BS40 222 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 HTATIP2Q9BUP3 242 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 NT5C3AQ9H0P0 336 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 FBXO2Q9UK22 296 aaPredicted RBP15.78■□□□□ 0.12
CMTM1-218ENST00000533915 WDR81Q562E7 1941 aa15.78■□□□□ 0.12
CMTM1-218ENST00000533915 NRCAMQ92823 1304 aa15.77■□□□□ 0.12
CMTM1-218ENST00000533915 GOLGA6L4A6NEF3 574 aa15.77■□□□□ 0.12
CMTM1-218ENST00000533915 RRN3P2A6NIE6 340 aa15.77■□□□□ 0.12
CMTM1-218ENST00000533915 HAS3O00219 553 aa15.77■□□□□ 0.12
CMTM1-218ENST00000533915 TLR3O15455 904 aaKnown RBP15.77■□□□□ 0.12
CMTM1-218ENST00000533915 OATP04181 439 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms