RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 TMEM8BA6NDV4 472 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 POTEMA6NI47 508 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 LILRB5O75023 590 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 LRP3O75074 770 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 GNAI2P04899 355 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 CFHP08603 1231 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 MCCP23508 829 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 PAN2Q504Q3 1202 aaKnown RBP10.57□□□□□ -0.72
PACS1-213ENST00000533756 SBK1Q52WX2 424 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 ZNF444Q8N0Y2 327 aaPredicted RBP10.57□□□□□ -0.72
PACS1-213ENST00000533756 CLEC4DQ8WXI8 215 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 ZNF287Q9HBT7 754 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 HCFC2Q9Y5Z7 792 aa10.57□□□□□ -0.72
PACS1-213ENST00000533756 BAZ2AQ9UIF9 1905 aaKnown RBP10.56□□□□□ -0.72
PACS1-213ENST00000533756 MYH4Q9Y623 1939 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 KIAA1671Q9BY89 1806 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 HIDE1A8MVS5 230 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 C1QTNF9BB2RNN3 333 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 CHRNA1P02708 482 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 C1QTNF9P0C862 333 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 SMIM10L2AP0DMW4 78 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 SMIM10L2BP0DMW5 78 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 GHRP10912 638 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 PLCB3Q01970 1234 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 NONOQ15233 471 aaKnown RBP eCLIP10.56□□□□□ -0.72
PACS1-213ENST00000533756 STXBP2Q15833 593 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 PLPP4Q5VZY2 271 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 KCTD1Q719H9 257 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 MRPS27Q92552 414 aaKnown RBP10.56□□□□□ -0.72
PACS1-213ENST00000533756 C16orf70Q9BSU1 422 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 MAF1Q9H063 256 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 ZSCAN32Q9NX65 697 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.56□□□□□ -0.72
PACS1-213ENST00000533756 SLC4A4Q9Y6R1 1079 aa10.56□□□□□ -0.72
PACS1-213ENST00000533756 MAST4O15021 2626 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 SRRM3A6NNA2 597 aaPredicted RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 H3BRB1 525 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 LAMTOR5O43504 91 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 NARSO43776 548 aaKnown RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 FOXD2O60548 495 aaPredicted RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 SURF6O75683 361 aaKnown RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 WEE2P0C1S8 567 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 CHRM1P11229 460 aaPredicted RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 RARSP54136 660 aaKnown RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 SPEM2Q0P670 501 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 LPIN1Q14693 890 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 SPOUT1Q5T280 376 aaKnown RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 RTN4RL1Q86UN2 441 aaPredicted RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 THNSL1Q8IYQ7 743 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 RGS22Q8NE09 1264 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 NEDD1Q8NHV4 660 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 NELL1Q92832 810 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 IWS1Q96ST2 819 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 TCF25Q9BQ70 676 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 FTHL17Q9BXU8 183 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 TUT1Q9H6E5 874 aaKnown RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 ENTPD7Q9NQZ7 604 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 DZANK1Q9NVP4 752 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 NOB1Q9ULX3 412 aaKnown RBP10.55□□□□□ -0.72
PACS1-213ENST00000533756 CA14Q9ULX7 337 aa10.55□□□□□ -0.72
PACS1-213ENST00000533756 MYH7BA7E2Y1 1941 aa10.54□□□□□ -0.72
PACS1-213ENST00000533756 EIF3JO75822 258 aaKnown RBP10.54□□□□□ -0.72
PACS1-213ENST00000533756 GLULP15104 373 aa10.54□□□□□ -0.72
PACS1-213ENST00000533756 ADD2P35612 726 aa10.54□□□□□ -0.72
PACS1-213ENST00000533756 CSTF1Q05048 431 aaKnown RBP10.54□□□□□ -0.72
PACS1-213ENST00000533756 PPP4R3BQ5MIZ7 849 aa10.54□□□□□ -0.72
PACS1-213ENST00000533756 RARS2Q5T160 578 aaKnown RBP10.54□□□□□ -0.72
PACS1-213ENST00000533756 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
PACS1-213ENST00000533756 PJA1Q8NG27 643 aa10.54□□□□□ -0.72
PACS1-213ENST00000533756 NSUN6Q8TEA1 469 aaKnown RBP10.54□□□□□ -0.72
PACS1-213ENST00000533756 LINC01599Q8WXQ3 324 aa10.54□□□□□ -0.72
PACS1-213ENST00000533756 PLIN4Q96Q06 1357 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 GOLIM4O00461 696 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 SRFP11831 508 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 ADAM17P78536 824 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 APOBRQ0VD83 1088 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 CSRP2Q16527 193 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 HSDL1Q3SXM5 330 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 FBXO47Q5MNV8 452 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 IL31Q6EBC2 164 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 GIMAP6Q6P9H5 292 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 BTNL9Q6UXG8 535 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 TSHZ1Q6ZSZ6 1077 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 CCDC149Q6ZUS6 474 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 STK11IPQ8N1F8 1099 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 MRPL43Q8N983 215 aaKnown RBP10.53□□□□□ -0.72
PACS1-213ENST00000533756 SSH3Q8TE77 659 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 NXPE3Q969Y0 559 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 BCO2Q9BYV7 579 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 SETD4Q9NVD3 440 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 SPATA6Q9NWH7 488 aaPredicted RBP10.53□□□□□ -0.72
PACS1-213ENST00000533756 ANKFY1Q9P2R3 1169 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 LRFN2Q9ULH4 789 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 PCDHB8Q9UN66 801 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 NOP58Q9Y2X3 529 aaKnown RBP10.53□□□□□ -0.72
PACS1-213ENST00000533756 MRVI1Q9Y6F6 885 aa10.53□□□□□ -0.72
PACS1-213ENST00000533756 MINDY4BA8MYZ0 360 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 CLASP2O75122 1294 aaKnown RBP10.52□□□□□ -0.73
PACS1-213ENST00000533756 RETP07949 1114 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms