RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 L2HGDHQ9H9P8 463 aa3.97□□□□□ -1.77
ATM-220ENST00000533526 KCNH7Q9NS40 1196 aa3.97□□□□□ -1.77
ATM-220ENST00000533526 ARHGAP20Q9P2F6 1191 aa3.97□□□□□ -1.77
ATM-220ENST00000533526 ARHGAP28Q9P2N2 729 aa3.97□□□□□ -1.77
ATM-220ENST00000533526 CROTQ9UKG9 612 aa3.97□□□□□ -1.77
ATM-220ENST00000533526 C9orf118A6NHY6 69 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 ZNF839A8K0R7 811 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 DDX3XO00571 662 aaKnown RBP eCLIP3.96□□□□□ -1.78
ATM-220ENST00000533526 C4BPAP04003 597 aaKnown RBP3.96□□□□□ -1.78
ATM-220ENST00000533526 ZNF28P17035 718 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 POU3F2P20265 443 aaPredicted RBP3.96□□□□□ -1.78
ATM-220ENST00000533526 HSD3B2P26439 372 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 SDHAP31040 664 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 MECP2P51608 486 aaKnown RBP3.96□□□□□ -1.78
ATM-220ENST00000533526 IRF9Q00978 393 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 SMAD2Q15796 467 aaKnown RBP3.96□□□□□ -1.78
ATM-220ENST00000533526 SKIDA1Q1XH10 827 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 CC2D1AQ6P1N0 951 aaPredicted RBP3.96□□□□□ -1.78
ATM-220ENST00000533526 PKN3Q6P5Z2 889 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 KRTAP1-3Q8IUG1 177 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 NOSTRINQ8IVI9 506 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 NIM1KQ8IY84 436 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 PPM1KQ8N3J5 372 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 CHST14Q8NCH0 376 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 ADAMTS17Q8TE56 1095 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 DDX1Q92499 740 aaKnown RBP3.96□□□□□ -1.78
ATM-220ENST00000533526 DLG3Q92796 817 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 LCORQ96JN0 433 aaPredicted RBP3.96□□□□□ -1.78
ATM-220ENST00000533526 SYT3Q9BQG1 590 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 FTSJ1Q9UET6 329 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 WASF3Q9UPY6 502 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 ZKSCAN5Q9Y2L8 839 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 ASB1Q9Y576 335 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 B3GALT1Q9Y5Z6 326 aa3.96□□□□□ -1.78
ATM-220ENST00000533526 A0A1B0GTL3 188 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 PRAMEF25A6NGN4 478 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 TRAF5O00463 557 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 SCDO00767 359 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 GLRX3O76003 335 aaKnown RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 CYP1A1P04798 512 aaPredicted RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 ZBTB48P10074 688 aaPredicted RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 PTGS1P23219 599 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 NEK4P51957 841 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 MLLT6P55198 1093 aaPredicted RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 GJA9P57773 515 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 ZNF460Q14592 562 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 ZNF174Q15697 407 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 TKFCQ3LXA3 575 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 RGL3Q3MIN7 710 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 DALRD3Q5D0E6 543 aaKnown RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 NT5DC1Q5TFE4 455 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 PIK3R6Q5UE93 754 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 MCTP2Q6DN12 878 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 GIMAP6Q6P9H5 292 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 TRMT10BQ6PF06 316 aaKnown RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 TTLL10Q6ZVT0 673 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 CXXC5Q7LFL8 322 aaKnown RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 FRMD5Q7Z6J6 570 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 LRRTM3Q86VH5 581 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 ZNF761Q86XN6 746 aaPredicted RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 ADGRG2Q8IZP9 1017 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 TXNDC5Q8NBS9 432 aaKnown RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 WDR48Q8TAF3 677 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 E2F7Q96AV8 911 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 MFSD3Q96ES6 412 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 ZSWIM3Q96MP5 696 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 SPATA25Q9BR10 227 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 TMEM168Q9H0V1 697 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 SLKQ9H2G2 1235 aaPredicted RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 TMX1Q9H3N1 280 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 BARX1Q9HBU1 254 aaPredicted RBP3.95□□□□□ -1.78
ATM-220ENST00000533526 ACSS2Q9NR19 701 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 USP40Q9NVE5 1235 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 IFT57Q9NWB7 429 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 GALNT8Q9NY28 637 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 B4GALT6Q9UBX8 382 aa3.95□□□□□ -1.78
ATM-220ENST00000533526 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.94□□□□□ -1.78
ATM-220ENST00000533526 PTPDC1A2A3K4 754 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 MROH6A6NGR9 719 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 H7C1D1 291 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 CBX4O00257 560 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 KCNK3O14649 394 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 FOXP2O15409 715 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 NOBOXO60393 691 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 CYP17A1P05093 508 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 INHBBP09529 407 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 AOAHP28039 575 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 TMEM132BQ14DG7 1078 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 C21orf62-AS1Q17RA5 79 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 ERICH6BQ5W0A0 696 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 CPZQ66K79 652 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 SDE2Q6IQ49 451 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 CNNM4Q6P4Q7 775 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 BORAQ6PGQ7 559 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 NME9Q86XW9 330 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 DHX37Q8IY37 1157 aaKnown RBP3.94□□□□□ -1.78
ATM-220ENST00000533526 CALML6Q8TD86 181 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 SCYL1Q96KG9 808 aa3.94□□□□□ -1.78
ATM-220ENST00000533526 YTHDC1Q96MU7 727 aaKnown RBP3.94□□□□□ -1.78
ATM-220ENST00000533526 GBP4Q96PP9 640 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms