RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 RPAINQ86UA6 219 aa18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 GIMAP8Q8ND71 665 aaPredicted RBP18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 C11orf84Q9BUA3 381 aaPredicted RBP18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 LY9Q9HBG7 655 aa18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 PKD2L1Q9P0L9 805 aa18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 TUBE1Q9UJT0 475 aa18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 FAM50BQ9Y247 325 aa18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 DNAH14Q0VDD8 3507 aa18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 EVPLQ92817 2033 aa18.05■□□□□ 0.48
CHMP4A-207ENST00000533523 CACNA1AO00555 2505 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 MEIS2O14770 477 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 LTBRP36941 435 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 LPIN1Q14693 890 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 GRIK4Q16099 956 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 CSPP1Q1MSJ5 1256 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 TAF2Q6P1X5 1199 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 NFXL1Q6ZNB6 911 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 RSPH3Q86UC2 560 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 IGDCC4Q8TDY8 1250 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 GPRASP2Q96D09 838 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 MTA3Q9BTC8 594 aa18.04■□□□□ 0.48
CHMP4A-207ENST00000533523 PIK3CDO00329 1044 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 SLC27A2O14975 620 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 SEC24BO95487 1268 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 ALADP13716 330 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 KCNA2P16389 499 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 MGAT3Q09327 533 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 CLUL1Q15846 466 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 UBE2SQ16763 222 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 CREB3L3Q68CJ9 461 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 GLG1Q92896 1179 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 CDHR1Q96JP9 859 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 RWDD3Q9Y3V2 267 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 PLXNA4Q9HCM2 1894 aa18.03■□□□□ 0.48
CHMP4A-207ENST00000533523 FRYLO94915 3013 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 GRM6O15303 877 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 RXRAP19793 462 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 IRS1P35568 1242 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 IGBP1P78318 339 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 NECTIN1Q15223 517 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 IER5LQ5T953 404 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 DNAJB3Q8WWF6 145 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 MAP3K14Q99558 947 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 ERAP1Q9NZ08 941 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 CDY2AQ9Y6F7 541 aa18.02■□□□□ 0.48
CHMP4A-207ENST00000533523 MYH9P35579 1960 aaKnown RBP18.02■□□□□ 0.47
CHMP4A-207ENST00000533523 C5orf67F2Z3F1 127 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 PRC1O43663 620 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 ATP9AO75110 1047 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 LINC00271P0C7V0 271 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 MCM5P33992 734 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 DLX2Q07687 328 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 MTMR1Q13613 665 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 BTG3Q14201 252 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 FBXO47Q5MNV8 452 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 TSHZ1Q6ZSZ6 1077 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 RAB11FIP4Q86YS3 637 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 CMTR1Q8N1G2 835 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 SEPT1Q8WYJ6 367 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 LZTS2Q9BRK4 669 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 FAM49AQ9H0Q0 323 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 LMAN2LQ9H0V9 348 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 PSTPIP2Q9H939 334 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 EHMT1Q9H9B1 1298 aa18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 RC3H2Q9HBD1 1191 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 FNDC1Q4ZHG4 1894 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-207ENST00000533523 hCG_1642624A0A1W2PR95 340 aa18■□□□□ 0.47
CHMP4A-207ENST00000533523 CCDC69A6NI79 296 aa18■□□□□ 0.47
CHMP4A-207ENST00000533523 EIF5BO60841 1220 aaKnown RBP18■□□□□ 0.47
CHMP4A-207ENST00000533523 RB1P06400 928 aa18■□□□□ 0.47
CHMP4A-207ENST00000533523 ITGB5P18084 799 aa18■□□□□ 0.47
CHMP4A-207ENST00000533523 BMPR1AP36894 532 aa18■□□□□ 0.47
CHMP4A-207ENST00000533523 GNAQP50148 359 aa18■□□□□ 0.47
CHMP4A-207ENST00000533523 MRPS6P82932 125 aaKnown RBP18■□□□□ 0.47
CHMP4A-207ENST00000533523 SRBD1Q8N5C6 995 aaKnown RBP18■□□□□ 0.47
CHMP4A-207ENST00000533523 ZBTB10Q96DT7 871 aa18■□□□□ 0.47
CHMP4A-207ENST00000533523 TMEM87BQ96K49 555 aa18■□□□□ 0.47
CHMP4A-207ENST00000533523 PRKAG3Q9UGI9 489 aa18■□□□□ 0.47
CHMP4A-207ENST00000533523 GSTTP1A0A1W2PQM5 241 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 MBLAC1A4D2B0 266 aaPredicted RBP17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 SPDYE3A6NKU9 549 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 SH2B2O14492 632 aaPredicted RBP17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 NCK2O43639 380 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 CD52P31358 61 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 HYAL1Q12794 435 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 ADHFE1Q8IWW8 467 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 TMTC2Q8N394 836 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 CLP1Q92989 425 aaKnown RBP17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 SMARCAD1Q9H4L7 1026 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 IGFLR1Q9H665 355 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 MUTYHQ9UIF7 546 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 TRPC6Q9Y210 931 aa17.99■□□□□ 0.47
CHMP4A-207ENST00000533523 WDR81Q562E7 1941 aa17.98■□□□□ 0.47
CHMP4A-207ENST00000533523 M0QZ92 97 aa17.98■□□□□ 0.47
CHMP4A-207ENST00000533523 ENPP3O14638 875 aa17.98■□□□□ 0.47
CHMP4A-207ENST00000533523 REC8O95072 547 aa17.98■□□□□ 0.47
CHMP4A-207ENST00000533523 MMP1P03956 469 aa17.98■□□□□ 0.47
CHMP4A-207ENST00000533523 SMARCA1P28370 1054 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms