RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TPH2Q8IWU9 490 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 ANKLE1Q8NAG6 615 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 RDM1Q8NG50 284 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 RASSF8Q8NHQ8 419 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 TNPO1Q92973 898 aaKnown RBP19.61■□□□□ 0.73
NXF1-216ENST00000533499 DYDC2Q96IM9 177 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 CLIC6Q96NY7 704 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 SMARCAD1Q9H4L7 1026 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 GDPD2Q9HCC8 539 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 STARD7Q9NQZ5 370 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 RGL1Q9NZL6 768 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 PHF24Q9UPV7 400 aa19.61■□□□□ 0.73
NXF1-216ENST00000533499 MYH9P35579 1960 aaKnown RBP19.61■□□□□ 0.73
NXF1-216ENST00000533499 H3BRB1 525 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 CDC25AP30304 524 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 CCT6AP40227 531 aaKnown RBP19.6■□□□□ 0.73
NXF1-216ENST00000533499 ATN1P54259 1190 aaPredicted RBP19.6■□□□□ 0.73
NXF1-216ENST00000533499 NKX3-2P78367 333 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 GRIN1Q05586 938 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 SPIRE1Q08AE8 756 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 CTTNQ14247 550 aaKnown RBP19.6■□□□□ 0.73
NXF1-216ENST00000533499 MFSD10Q14728 455 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 KIAA0753Q2KHM9 967 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 SPECC1Q5M775 1068 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 KRI1Q8N9T8 703 aaKnown RBP19.6■□□□□ 0.73
NXF1-216ENST00000533499 KCNG4Q8TDN1 519 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 PCYT2Q99447 389 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 EIF2AK1Q9BQI3 630 aaKnown RBP19.6■□□□□ 0.73
NXF1-216ENST00000533499 TUT1Q9H6E5 874 aaKnown RBP19.6■□□□□ 0.73
NXF1-216ENST00000533499 C11orf49Q9H6J7 331 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 TRPC6Q9Y210 931 aa19.6■□□□□ 0.73
NXF1-216ENST00000533499 CABYRO75952 493 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 ATG7O95352 703 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 UGCGQ16739 394 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 KRT79Q5XKE5 535 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 B3GNT9Q6UX72 402 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 NECAB2Q7Z6G3 386 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 SNX29Q8TEQ0 813 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 LEO1Q8WVC0 666 aaPredicted RBP19.59■□□□□ 0.73
NXF1-216ENST00000533499 ATP6V0A1Q93050 837 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 C16orf70Q9BSU1 422 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 KATNAL1Q9BW62 490 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 CSRNP2Q9H175 543 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 ERAP1Q9NZ08 941 aa19.59■□□□□ 0.73
NXF1-216ENST00000533499 FBXO2Q9UK22 296 aaPredicted RBP19.59■□□□□ 0.73
NXF1-216ENST00000533499 EMSYQ7Z589 1322 aa19.58■□□□□ 0.73
NXF1-216ENST00000533499 LGR5O75473 907 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 CAPN15O75808 1086 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 HOXD8P13378 290 aaPredicted RBP19.58■□□□□ 0.72
NXF1-216ENST00000533499 UBA7P41226 1012 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 QARSP47897 775 aaKnown RBP19.58■□□□□ 0.72
NXF1-216ENST00000533499 PDIA5Q14554 519 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 HAUS3Q68CZ6 603 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 C7orf31Q8N865 590 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 KAT2BQ92831 832 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 CDK5RAP3Q96JB5 506 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 PLIN2Q99541 437 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 LXNQ9BS40 222 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 SCAND2PQ9GZW5 306 aaPredicted RBP19.58■□□□□ 0.72
NXF1-216ENST00000533499 RCOR1Q9UKL0 485 aa19.58■□□□□ 0.72
NXF1-216ENST00000533499 SRPRBQ9Y5M8 271 aaKnown RBP19.58■□□□□ 0.72
NXF1-216ENST00000533499 DDX11L8A8MPP1 907 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 PPP6R2O75170 966 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 F2P00734 622 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 P4HBP07237 508 aaKnown RBP19.57■□□□□ 0.72
NXF1-216ENST00000533499 CAPN2P17655 700 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 LONP1P36776 959 aaKnown RBP19.57■□□□□ 0.72
NXF1-216ENST00000533499 MNX1P50219 401 aaPredicted RBP19.57■□□□□ 0.72
NXF1-216ENST00000533499 PSMC5P62195 406 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 IGBP1P78318 339 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 PRKCEQ02156 737 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 ITGA7Q13683 1181 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 NBPF20Q3BBV1 942 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 PLPPR4Q7Z2D5 763 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 IGSF22Q8N9C0 903 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 CCDC43Q96MW1 224 aaKnown RBP19.57■□□□□ 0.72
NXF1-216ENST00000533499 SEPT9Q9UHD8 586 aaPredicted RBP19.57■□□□□ 0.72
NXF1-216ENST00000533499 WDR81Q562E7 1941 aa19.57■□□□□ 0.72
NXF1-216ENST00000533499 A0A087WWV3 80 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 IGKV6D-21A0A0A0MT36 114 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 A0A0U1RQG5 324 aaPredicted RBP19.56■□□□□ 0.72
NXF1-216ENST00000533499 POTEB3A0JP26 581 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 DKC1O60832 514 aaKnown RBP eCLIP19.56■□□□□ 0.72
NXF1-216ENST00000533499 CUTAO60888 179 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 MED24O75448 989 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 PLCB4Q15147 1175 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 POTEBQ6S5H4 581 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 CABP7Q86V35 215 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 NEK9Q8TD19 979 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 RNPEPQ9H4A4 650 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 ZSWIM4Q9H7M6 989 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 PCDHA7Q9UN72 937 aa19.56■□□□□ 0.72
NXF1-216ENST00000533499 SLITRK3O94933 977 aa19.55■□□□□ 0.72
NXF1-216ENST00000533499 TXLNAP40222 546 aa19.55■□□□□ 0.72
NXF1-216ENST00000533499 PPFIA1Q13136 1202 aa19.55■□□□□ 0.72
NXF1-216ENST00000533499 POTEGQ6S5H5 508 aa19.55■□□□□ 0.72
NXF1-216ENST00000533499 CATSPER3Q86XQ3 398 aa19.55■□□□□ 0.72
NXF1-216ENST00000533499 AFAP1L1Q8TED9 768 aa19.55■□□□□ 0.72
NXF1-216ENST00000533499 KAT6AQ92794 2004 aa19.55■□□□□ 0.72
NXF1-216ENST00000533499 AK8Q96MA6 479 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms