RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	JAM2	P57087	298 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	NKX3-2	P78367	333 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	OCRL	Q01968	901 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	TUSC3	Q13454	348 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	ZNF174	Q15697	407 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	ABHD17C	Q6PCB6	329 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	KRT26	Q7Z3Y9	468 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	FAM126B	Q8IXS8	530 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	CPA5	Q8WXQ8	436 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	SCYL1	Q96KG9	808 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	DTL	Q9NZJ0	730 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	GSG1L2	A8MUP6	293 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	CBX4	O00257	560 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	N4BP3	O15049	544 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	BTBD8	Q5XKL5	378 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	LDHD	Q86WU2	507 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	PTRH1	Q86Y79	214 aa	Known RBP	4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	MIB1	Q86YT6	1006 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	PASD1	Q8IV76	773 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	MZB1	Q8WU39	189 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	LEO1	Q8WVC0	666 aa	Predicted RBP	4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	MRI	Q9BWK5	157 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	B4GALT6	Q9UBX8	382 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	MBD1	Q9UIS9	605 aa	Predicted RBP	4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	MYOCOS	A0A1B0GUC4	107 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	PTPDC1	A2A3K4	754 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299		H7C1D1	291 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	AMY2A	P04746	511 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	ASGR2	P07307	311 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	AMY2B	P19961	511 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	PML	P29590	882 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	IRF9	Q00978	393 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	CACNB2	Q08289	660 aa	Predicted RBP	4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	OTOP1	Q7RTM1	612 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	THNSL2	Q86YJ6	484 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	ARRDC4	Q8NCT1	418 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	USP7	Q93009	1102 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	BDH2	Q9BUT1	245 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	CNTD2	Q9H8S5	307 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	RIC8B	Q9NVN3	520 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	HCFC2	Q9Y5Z7	792 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	IRS2	Q9Y4H2	1338 aa		4.71	□□□□□ -1.66
LMO7-223	ENST00000533299	MAN2B1	O00754	1011 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	F2	P00734	622 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	VIL1	P09327	827 aa	Known RBP	4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	CYP2C8	P10632	490 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	MECP2	P51608	486 aa	Known RBP	4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	DHCR24	Q15392	516 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	ZNF827	Q17R98	1081 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	PAN2	Q504Q3	1202 aa	Known RBP	4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	CD300LD	Q6UXZ3	194 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	C11orf74	Q86VG3	221 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	CD244	Q9BZW8	370 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	PCIF1	Q9H4Z3	704 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	SMURF1	Q9HCE7	757 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	KCNH7	Q9NS40	1196 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	PCDHA5	Q9Y5H7	936 aa		4.7	□□□□□ -1.66
LMO7-223	ENST00000533299	TCRBV5S4A2T	A0A5A2	114 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	TRAF5	O00463	557 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	SCD	O00767	359 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	BUB1B	O60566	1050 aa	Predicted RBP	4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	KRT37	O76014	449 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	FAH	P16930	419 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	PTPN1	P18031	435 aa	Known RBP	4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	GRIN1	Q05586	938 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	PKN3	Q6P5Z2	889 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	ZNF662	Q6ZS27	426 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	RNF180	Q86T96	592 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	SH3RF2	Q8TEC5	729 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	CLEC4D	Q8WXI8	215 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	DACT3	Q96B18	629 aa	Predicted RBP	4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	TTC1	Q99614	292 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	MTFR1L	Q9H019	292 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	GCM1	Q9NP62	436 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	LUC7L	Q9NQ29	371 aa	Known RBP	4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	ACSS2	Q9NR19	701 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	HSPBP1	Q9NZL4	362 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	MCM8	Q9UJA3	840 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	IRAK3	Q9Y616	596 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	CDR1	P51861	262 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	KPNA1	P52294	538 aa	Predicted RBP	4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	IL2	P60568	153 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	B3GNT8	Q7Z7M8	397 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	ZDHHC14	Q8IZN3	488 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	SIGLEC10	Q96LC7	697 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	BCAS3	Q9H6U6	928 aa		4.69	□□□□□ -1.66
LMO7-223	ENST00000533299	PRAMEF25	A6NGN4	478 aa		4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	ZEB2	O60315	1214 aa		4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	BRINP1	O60477	761 aa		4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	CYP7B1	O75881	506 aa		4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	CYP17A1	P05093	508 aa		4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	ENO2	P09104	434 aa	Predicted RBP	4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	HERVK_113	P62684	666 aa		4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	VASN	Q6EMK4	673 aa		4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	TEPP	Q6URK8	271 aa		4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	NOSTRIN	Q8IVI9	506 aa		4.68	□□□□□ -1.66
LMO7-223	ENST00000533299	RBM12B	Q8IXT5	1001 aa	Known RBP	4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms