RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ARHGAP25P42331 645 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 PSMD2Q13200 908 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 POTEDQ86YR6 584 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 CASP1P29466 404 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 RBBP5Q15291 538 aaKnown RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 MAN2A1Q16706 1144 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 SLFN12LQ6IEE8 588 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 EFCAB13Q8IY85 973 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 GIMAP8Q8ND71 665 aaPredicted RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 TCP11Q8WWU5 503 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 MRPL47Q9HD33 250 aaKnown RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 EPN1Q9Y6I3 576 aaPredicted RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 GOLGA8SH3BPF8 625 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 BRD3Q15059 726 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 SH2D4BQ5SQS7 431 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 ADGRF4Q8IZF3 695 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 SKA2Q8WVK7 121 aaPredicted RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 SLC38A10Q9HBR0 1119 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 CPS1P31327 1500 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 NEXMIFQ5QGS0 1516 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 TBC1D16Q8TBP0 767 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 SCYL1Q96KG9 808 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 ELP3Q9H9T3 547 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 EMILIN3Q9NT22 766 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 PLEKHG2Q9H7P9 1386 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 ITPK1Q13572 414 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 PRR5LQ6MZQ0 368 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 GPATCH11Q8N954 259 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 UHMK1Q8TAS1 419 aaKnown RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 NCAPGQ9BPX3 1015 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 LY9Q9HBG7 655 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 SAMSN1Q9NSI8 373 aaKnown RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 GFPT2O94808 682 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 CHGBP05060 677 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 SLFN14P0C7P3 912 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 RFX6Q8HWS3 928 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 APOBEC3FQ8IUX4 373 aaKnown RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 LRRC8AQ8IWT6 810 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 FAM133AQ8N9E0 248 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 TRIM56Q9BRZ2 755 aaKnown RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 SRPRBQ9Y5M8 271 aaKnown RBP16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 MAD1L1Q9Y6D9 718 aa16.01■□□□□ 0.15
PCDHA9-202ENST00000532602 NFKBIAP25963 317 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 RRAGDQ9NQL2 400 aaPredicted RBP16■□□□□ 0.15
PCDHA9-202ENST00000532602 SAT1P21673 171 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 CDC27P30260 824 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 JAK3P52333 1124 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 SIX6OS1Q8N1H7 587 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 GCNT4Q9P109 453 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 NFX1Q12986 1120 aaKnown RBP16■□□□□ 0.15
PCDHA9-202ENST00000532602 EZH2Q15910 746 aaKnown RBP16■□□□□ 0.15
PCDHA9-202ENST00000532602 TTC31Q49AM3 519 aaPredicted RBP16■□□□□ 0.15
PCDHA9-202ENST00000532602 CCDC13Q8IYE1 715 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 ANKRD42Q8N9B4 389 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 STAT3P40763 770 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 FAM71BQ8TC56 605 aa16■□□□□ 0.15
PCDHA9-202ENST00000532602 MXI1P50539 228 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 ATG9AQ7Z3C6 839 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 LMNTD2Q8IXW0 634 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 RYBPQ8N488 228 aaPredicted RBP15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 ZNF653Q96CK0 615 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 MMP19Q99542 508 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 KIF9Q9HAQ2 790 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 USH1CQ9Y6N9 552 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 GSG1L2A8MUP6 293 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 F8W8V4 182 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 RPF1Q9H9Y2 349 aaKnown RBP15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 USP31Q70CQ4 1352 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 ENC1O14682 589 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 HEXIM1O94992 359 aaKnown RBP15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 TSNAXIP1Q2TAA8 658 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 RNF139Q8WU17 664 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 CAMTA2O94983 1202 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 MAPK4P31152 587 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 RCSD1Q6JBY9 416 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 AKR1B1P15121 316 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 STXBP2Q15833 593 aa15.99■□□□□ 0.15
PCDHA9-202ENST00000532602 K7ERI5 159 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 BUB1BO60566 1050 aaPredicted RBP15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 MSTO1Q9BUK6 570 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 RPAP3Q9H6T3 665 aaPredicted RBP15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 PTPRMP28827 1452 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 TECPR2O15040 1411 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 SPATA31A6Q5VVP1 1343 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 LDHAP00338 332 aaKnown RBP15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 INPP5BP32019 993 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 YWHAGP61981 247 aaKnown RBP eCLIP15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 EHHADHQ08426 723 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 STAG2Q8N3U4 1231 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 ARL6IP4Q66PJ3 421 aaKnown RBP15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 DNAJC24Q6P3W2 148 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 SH3GLB2Q9NR46 395 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 KLHL14Q9P2G3 628 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 WDR64B1ANS9 1081 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 KRT3P12035 628 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms