RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-208ENST00000532056 PPP1R13LQ8WUF5 828 aa11.33□□□□□ -0.6
KNL1-208ENST00000532056 ZSCAN16Q9H4T2 348 aaPredicted RBP11.33□□□□□ -0.6
KNL1-208ENST00000532056 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
KNL1-208ENST00000532056 HDAC6Q9UBN7 1215 aa11.33□□□□□ -0.6
KNL1-208ENST00000532056 GTF2IRD1Q9UHL9 959 aa11.33□□□□□ -0.6
KNL1-208ENST00000532056 PCDHA12Q9UN75 941 aa11.33□□□□□ -0.6
KNL1-208ENST00000532056 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
KNL1-208ENST00000532056 NR2E3Q9Y5X4 410 aa11.33□□□□□ -0.6
KNL1-208ENST00000532056 C17orf102A2RUQ5 167 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 B4GALT4O60513 344 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 SMIM10L2AP0DMW4 78 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 SMIM10L2BP0DMW5 78 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 MARK3P27448 753 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 HOXC8P31273 242 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 FAAP100Q0VG06 881 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 PLCB4Q15147 1175 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 EPHA7Q15375 998 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 GDF6Q6KF10 455 aaPredicted RBP11.32□□□□□ -0.6
KNL1-208ENST00000532056 PDXDC2PQ6P474 469 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 TNPO1Q92973 898 aaKnown RBP11.32□□□□□ -0.6
KNL1-208ENST00000532056 TRPV6Q9H1D0 765 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 RNPEPQ9H4A4 650 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 TTC12Q9H892 705 aaPredicted RBP11.32□□□□□ -0.6
KNL1-208ENST00000532056 TRMT13Q9NUP7 481 aaKnown RBP11.32□□□□□ -0.6
KNL1-208ENST00000532056 GABBR1Q9UBS5 961 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 MYH15Q9Y2K3 1946 aa11.32□□□□□ -0.6
KNL1-208ENST00000532056 WDR81Q562E7 1941 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 LTBP2Q14767 1821 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 EML1O00423 815 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 KIAA0355O15063 1070 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 ZSCAN22P10073 491 aaPredicted RBP11.31□□□□□ -0.6
KNL1-208ENST00000532056 PRPHP41219 470 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.62e-7■■■■■ 31.4
KNL1-208ENST00000532056 ATP2C1P98194 919 aaPredicted RBP11.31□□□□□ -0.6
KNL1-208ENST00000532056 PPFIA1Q13136 1202 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 PTGDRQ13258 359 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 PTGISQ16647 500 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 TMEM266Q2M3C6 531 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 NCAPH2Q6IBW4 605 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 ATP8B4Q8TF62 1192 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 ATP6V0A1Q93050 837 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 FAM167AQ96KS9 214 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 PRDM5Q9NQX1 630 aaPredicted RBP11.31□□□□□ -0.6
KNL1-208ENST00000532056 TMEM39AQ9NV64 488 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 PRKAG2Q9UGJ0 569 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 TBX21Q9UL17 535 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 TRPC6Q9Y210 931 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 NOD1Q9Y239 953 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 NRCAMQ92823 1304 aa11.31□□□□□ -0.6
KNL1-208ENST00000532056 COL1A2P08123 1366 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 POTEB3A0JP26 581 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 POTEMA6NI47 508 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 HBP1O60381 514 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 DKC1O60832 514 aaKnown RBP eCLIP11.3□□□□□ -0.6
KNL1-208ENST00000532056 BMP15O95972 392 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 F13A1P00488 732 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 P4HBP07237 508 aaKnown RBP11.3□□□□□ -0.6
KNL1-208ENST00000532056 GNAT1P11488 350 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 INSRRP14616 1297 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 ATP4AP20648 1035 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 ANP32AP39687 249 aaKnown RBP11.3□□□□□ -0.6
KNL1-208ENST00000532056 PSMC5P62195 406 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 HIC1Q14526 733 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 GRIK4Q16099 956 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 UGCGQ16739 394 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 BANK1Q8NDB2 785 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 NEK9Q8TD19 979 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 LMBR1Q8WVP7 490 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
KNL1-208ENST00000532056 CTAGE1Q96RT6 745 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 SETD4Q9NVD3 440 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 ZMYND8Q9ULU4 1186 aaPredicted RBP11.3□□□□□ -0.6
KNL1-208ENST00000532056 CEP131Q9UPN4 1083 aa11.3□□□□□ -0.6
KNL1-208ENST00000532056 MYH9P35579 1960 aaKnown RBP11.29□□□□□ -0.6
KNL1-208ENST00000532056 TRIM43BA6NCK2 446 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 RRN3P2A6NIE6 340 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 ZNF862O60290 1169 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 BRD1O95696 1058 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 OATP04181 439 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 TECP42680 631 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 QARSP47897 775 aaKnown RBP11.29□□□□□ -0.6
KNL1-208ENST00000532056 ADAM17P78536 824 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 ZNF200P98182 395 aaPredicted RBP11.29□□□□□ -0.6
KNL1-208ENST00000532056 PRKCEQ02156 737 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 PTK7Q13308 1070 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 PKP1Q13835 747 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
KNL1-208ENST00000532056 ZNF484Q5JVG2 852 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
KNL1-208ENST00000532056 FAM173BQ6P4H8 233 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 CKAP2LQ8IYA6 745 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 CCDC155Q8N6L0 562 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 TRIM43Q96BQ3 446 aaPredicted RBP11.29□□□□□ -0.6
KNL1-208ENST00000532056 EIF2AK1Q9BQI3 630 aaKnown RBP11.29□□□□□ -0.6
KNL1-208ENST00000532056 LXNQ9BS40 222 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 NOC4LQ9BVI4 516 aaKnown RBP11.29□□□□□ -0.6
KNL1-208ENST00000532056 RAB34Q9BZG1 259 aa11.29□□□□□ -0.6
KNL1-208ENST00000532056 TANC1Q9C0D5 1861 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms