RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.285e-6■□□□□ 9.5
PPFIA1-220ENST00000532024 ATN1P54259 1190 aaPredicted RBP13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 PKP1Q13835 747 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 STK38Q15208 465 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 EPHA7Q15375 998 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 C1orf53Q5VUE5 145 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 SWSAP1Q6NVH7 229 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 SLC39A5Q6ZMH5 540 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 TRIM50Q86XT4 487 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 GJA10Q969M2 543 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 LRWD1Q9UFC0 647 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 NOD1Q9Y239 953 aa13.3□□□□□ -0.28
PPFIA1-220ENST00000532024 MYH15Q9Y2K3 1946 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 IGKV6D-21A0A0A0MT36 114 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 DCDC2CA8MYV0 355 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 P4HBP07237 508 aaKnown RBP13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 TECP42680 631 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 PSMC5P62195 406 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 PSMC6P62333 389 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 KRT85P78386 507 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 CEBPZQ03701 1054 aaKnown RBP13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 PDIA5Q14554 519 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 FAM173BQ6P4H8 233 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 B3GNT9Q6UX72 402 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 C4orf32Q8N8J7 132 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 KAT2BQ92831 832 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 AK8Q96MA6 479 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 IPO9Q96P70 1041 aaKnown RBP13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 GABBR1Q9UBS5 961 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 ATP11BQ9Y2G3 1177 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 IGSF9BQ9UPX0 1349 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 SCN10AQ9Y5Y9 1956 aa13.29□□□□□ -0.28
PPFIA1-220ENST00000532024 POTEB3A0JP26 581 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 VWA3AA6NCI4 1184 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 POTEMA6NI47 508 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 HAS3O00219 553 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 PQBP1O60828 265 aaKnown RBP13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 YEATS4O95619 227 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 NCLP19338 710 aaKnown RBP13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 MARK3P27448 753 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 QARSP47897 775 aaKnown RBP13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 RTP1P59025 263 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 PRKCEQ02156 737 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 SPIRE1Q08AE8 756 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 PPFIA1Q13136 1202 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 SNX17Q15036 470 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 KRT79Q5XKE5 535 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 POTEBQ6S5H4 581 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 SESTD1Q86VW0 696 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 SLC43A3Q8NBI5 491 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 KCNG4Q8TDN1 519 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 ATP8B4Q8TF62 1192 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 BBXQ8WY36 941 aaPredicted RBP13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 CCDC43Q96MW1 224 aaKnown RBP13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 USP28Q96RU2 1077 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 ZSWIM4Q9H7M6 989 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 NRBP2Q9NSY0 501 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 PRKAG2Q9UGJ0 569 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 MAFBQ9Y5Q3 323 aaPredicted RBP13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 CLIC4Q9Y696 253 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 MORC2Q9Y6X9 1032 aaPredicted RBP13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 NRCAMQ92823 1304 aa13.28□□□□□ -0.28
PPFIA1-220ENST00000532024 C17orf102A2RUQ5 167 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 RRN3P2A6NIE6 340 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 HBP1O60381 514 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 EVI5O60447 810 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 OATP04181 439 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 SMIM10L2AP0DMW4 78 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 SMIM10L2BP0DMW5 78 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 DDIT3P35638 169 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 LONP1P36776 959 aaKnown RBP13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 TXLNAP40222 546 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 SLC39A14Q15043 492 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 FOXD4L6Q3SYB3 417 aaPredicted RBP13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 TRIM60Q495X7 471 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 XKR3Q5GH77 459 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 FOXD4L3Q6VB84 417 aaPredicted RBP13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 ANKRD33Q7Z3H0 272 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 CCDC155Q8N6L0 562 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 IGSF22Q8N9C0 903 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 BANK1Q8NDB2 785 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 CDK5RAP3Q96JB5 506 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 TOX2Q96NM4 488 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 PCYT2Q99447 389 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 EIF2AK1Q9BQI3 630 aaKnown RBP13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 LXNQ9BS40 222 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 TUFT1Q9NNX1 390 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 CHMP5Q9NZZ3 219 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 GTF2IRD1Q9UHL9 959 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 TELO2Q9Y4R8 837 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 NR2E3Q9Y5X4 410 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 KDM3AQ9Y4C1 1321 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 COL1A2P08123 1366 aa13.27□□□□□ -0.29
PPFIA1-220ENST00000532024 BRCA2P51587 3418 aa13.26□□□□□ -0.29
PPFIA1-220ENST00000532024 EML1O00423 815 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms