RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 MARK3P27448 753 aa16.54■□□□□ 0.24
CTSB-221ENST00000531502 CAMK1Q14012 370 aa16.54■□□□□ 0.24
CTSB-221ENST00000531502 EP400NLQ6ZTU2 488 aa16.54■□□□□ 0.24
CTSB-221ENST00000531502 RTN4RL1Q86UN2 441 aaPredicted RBP16.54■□□□□ 0.24
CTSB-221ENST00000531502 ADHFE1Q8IWW8 467 aa16.54■□□□□ 0.24
CTSB-221ENST00000531502 CMTR1Q8N1G2 835 aaKnown RBP16.54■□□□□ 0.24
CTSB-221ENST00000531502 PCYT2Q99447 389 aa16.54■□□□□ 0.24
CTSB-221ENST00000531502 PSTPIP2Q9H939 334 aa16.54■□□□□ 0.24
CTSB-221ENST00000531502 SEC63Q9UGP8 760 aaKnown RBP16.54■□□□□ 0.24
CTSB-221ENST00000531502 FAM50BQ9Y247 325 aa16.54■□□□□ 0.24
CTSB-221ENST00000531502 RWDD3Q9Y3V2 267 aa16.54■□□□□ 0.24
CTSB-221ENST00000531502 RBM8AQ9Y5S9 174 aaKnown RBP16.54■□□□□ 0.24
CTSB-221ENST00000531502 CDY2AQ9Y6F7 541 aa16.54■□□□□ 0.24
CTSB-221ENST00000531502 GTF2F1P35269 517 aaKnown RBP eCLIP16.53■□□□□ 0.24
CTSB-221ENST00000531502 GNAQP50148 359 aa16.53■□□□□ 0.24
CTSB-221ENST00000531502 SMAD2Q15796 467 aaKnown RBP16.53■□□□□ 0.24
CTSB-221ENST00000531502 UBE2SQ16763 222 aa16.53■□□□□ 0.24
CTSB-221ENST00000531502 TSHZ1Q6ZSZ6 1077 aa16.53■□□□□ 0.24
CTSB-221ENST00000531502 RSPH3Q86UC2 560 aa16.53■□□□□ 0.24
CTSB-221ENST00000531502 ZBTB10Q96DT7 871 aa16.53■□□□□ 0.24
CTSB-221ENST00000531502 SMARCAD1Q9H4L7 1026 aa16.53■□□□□ 0.24
CTSB-221ENST00000531502 KIAA1671Q9BY89 1806 aa16.53■□□□□ 0.24
CTSB-221ENST00000531502 C5orf42Q9H799 3197 aa16.53■□□□□ 0.24
CTSB-221ENST00000531502 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.24
CTSB-221ENST00000531502 MBTPS2O43462 519 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 PRC1O43663 620 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 TBX10O75333 385 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 MMP1P03956 469 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 IRS1P35568 1242 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 MRPS6P82932 125 aaKnown RBP16.52■□□□□ 0.24
CTSB-221ENST00000531502 MTMR1Q13613 665 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 BTG3Q14201 252 aaPredicted RBP16.52■□□□□ 0.24
CTSB-221ENST00000531502 GLG1Q92896 1179 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 PLVAPQ9BX97 442 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 JADE2Q9NQC1 790 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 PKD2L1Q9P0L9 805 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 PLAGL2Q9UPG8 496 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 SQORQ9Y6N5 450 aa16.52■□□□□ 0.24
CTSB-221ENST00000531502 LOXHD1Q8IVV2 1947 aa16.52■□□□□ 0.23
CTSB-221ENST00000531502 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 MAFGO15525 162 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 INSRRP14616 1297 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 RXRAP19793 462 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 CD52P31358 61 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 LIFRP42702 1097 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 CASC1Q6TDU7 716 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 P2RX5Q93086 422 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 ALG13Q9NP73 1137 aaKnown RBP16.51■□□□□ 0.23
CTSB-221ENST00000531502 PCDHA6Q9UN73 950 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 PCDHA8Q9Y5H6 950 aa16.51■□□□□ 0.23
CTSB-221ENST00000531502 MRPL42Q9Y6G3 142 aaKnown RBP16.51■□□□□ 0.23
CTSB-221ENST00000531502 ZNF318Q5VUA4 2279 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 RRN3P2A6NIE6 340 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 LINC01565O15544 149 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 DNAJB1P25685 340 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 MCM5P33992 734 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 IGBP1P78318 339 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 ADAM15Q13444 863 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 CLUL1Q15846 466 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 CMTR2Q8IYT2 770 aaKnown RBP16.5■□□□□ 0.23
CTSB-221ENST00000531502 TMTC2Q8N394 836 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 TMEM87BQ96K49 555 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 UIMC1Q96RL1 719 aa16.5■□□□□ 0.23
CTSB-221ENST00000531502 FAM49AQ9H0Q0 323 aaPredicted RBP16.5■□□□□ 0.23
CTSB-221ENST00000531502 CCDC69A6NI79 296 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 TRIOO75962 3097 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 RPLP2P05387 115 aaKnown RBP16.49■□□□□ 0.23
CTSB-221ENST00000531502 ITGB1P05556 798 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 SMAD4Q13485 552 aaKnown RBP16.49■□□□□ 0.23
CTSB-221ENST00000531502 CSPP1Q1MSJ5 1256 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 IER5Q5VY09 327 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 NFXL1Q6ZNB6 911 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 TMTC3Q6ZXV5 915 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 ALYREFQ86V81 257 aaKnown RBP16.49■□□□□ 0.23
CTSB-221ENST00000531502 CYP2W1Q8TAV3 490 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 SPPL3Q8TCT6 385 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 MSLNLQ96KJ4 702 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 FTHL17Q9BXU8 183 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 LSG1Q9H089 658 aaKnown RBP16.49■□□□□ 0.23
CTSB-221ENST00000531502 JPH1Q9HDC5 661 aaPredicted RBP16.49■□□□□ 0.23
CTSB-221ENST00000531502 KCNH7Q9NS40 1196 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 SLC9A2Q9UBY0 812 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 PADI3Q9ULW8 664 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 PCDHA2Q9Y5H9 948 aa16.49■□□□□ 0.23
CTSB-221ENST00000531502 IGSF9BQ9UPX0 1349 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 SPDYE3A6NKU9 549 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 CALM1P0DP23 149 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 CALM2P0DP24 149 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 CALM3P0DP25 149 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 TMEM62Q0P6H9 643 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 PLCB4Q15147 1175 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 NAALADL2Q58DX5 795 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 HERC4Q5GLZ8 1057 aaPredicted RBP16.48■□□□□ 0.23
CTSB-221ENST00000531502 RAB11FIP4Q86YS3 637 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 NPAS4Q8IUM7 802 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 FANCBQ8NB91 859 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 TRAPPC12Q8WVT3 735 aa16.48■□□□□ 0.23
CTSB-221ENST00000531502 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
CTSB-221ENST00000531502 MXRA8Q9BRK3 442 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms