RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TMEM87BQ96K49 555 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 CLDND1Q9NY35 253 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 ADGRA3Q8IWK6 1321 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 PRC1O43663 620 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 DGKIO75912 1065 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 RPLP2P05387 115 aaKnown RBP17.13■□□□□ 0.33
CAPN1-219ENST00000530495 CALM1P0DP23 149 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 CALM2P0DP24 149 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 CALM3P0DP25 149 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 MARK3P27448 753 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 MCM5P33992 734 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 ZP2Q05996 745 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 NFXL1Q6ZNB6 911 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 TSHZ1Q6ZSZ6 1077 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 CMTR1Q8N1G2 835 aaKnown RBP17.13■□□□□ 0.33
CAPN1-219ENST00000530495 JADE2Q9NQC1 790 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 SQORQ9Y6N5 450 aa17.13■□□□□ 0.33
CAPN1-219ENST00000530495 CCDC69A6NI79 296 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 RRN3P2A6NIE6 340 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 DCXO43602 365 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 LIFRP42702 1097 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 HYAL1Q12794 435 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-219ENST00000530495 ADHFE1Q8IWW8 467 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 CRIPAKQ8N1N5 446 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
CAPN1-219ENST00000530495 PLVAPQ9BX97 442 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 AGO3Q9H9G7 860 aaKnown RBP17.12■□□□□ 0.33
CAPN1-219ENST00000530495 PCDHA6Q9UN73 950 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 PCDHA8Q9Y5H6 950 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 CDY2AQ9Y6F7 541 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 MYO7AQ13402 2215 aa17.12■□□□□ 0.33
CAPN1-219ENST00000530495 SPDYE3A6NKU9 549 aa17.11■□□□□ 0.33
CAPN1-219ENST00000530495 SH2B2O14492 632 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-219ENST00000530495 INSRRP14616 1297 aa17.11■□□□□ 0.33
CAPN1-219ENST00000530495 MRPS6P82932 125 aaKnown RBP17.11■□□□□ 0.33
CAPN1-219ENST00000530495 UBE2SQ16763 222 aa17.11■□□□□ 0.33
CAPN1-219ENST00000530495 IER5Q5VY09 327 aa17.11■□□□□ 0.33
CAPN1-219ENST00000530495 RTN4RL1Q86UN2 441 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-219ENST00000530495 PCYT2Q99447 389 aa17.11■□□□□ 0.33
CAPN1-219ENST00000530495 LOXHD1Q8IVV2 1947 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 MMP1P03956 469 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 RXRAP19793 462 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 IGBP1P78318 339 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 DLX2Q07687 328 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-219ENST00000530495 COL9A3Q14050 684 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-219ENST00000530495 SMAD2Q15796 467 aaKnown RBP17.1■□□□□ 0.33
CAPN1-219ENST00000530495 CSPP1Q1MSJ5 1256 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 FANCBQ8NB91 859 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
CAPN1-219ENST00000530495 P2RX5Q93086 422 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 FTHL17Q9BXU8 183 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 UPF3BQ9BZI7 483 aaKnown RBP17.1■□□□□ 0.33
CAPN1-219ENST00000530495 PKD2L1Q9P0L9 805 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 PLAGL2Q9UPG8 496 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 PCDHA2Q9Y5H9 948 aa17.1■□□□□ 0.33
CAPN1-219ENST00000530495 hCG_1642624A0A1W2PR95 340 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 CD52P31358 61 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 ADAM15Q13444 863 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 CAMK1Q14012 370 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 CMTR2Q8IYT2 770 aaKnown RBP17.09■□□□□ 0.33
CAPN1-219ENST00000530495 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 LINC01599Q8WXQ3 324 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 ZBTB10Q96DT7 871 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 UIMC1Q96RL1 719 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 MXRA8Q9BRK3 442 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 AZI2Q9H6S1 392 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 JPH1Q9HDC5 661 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-219ENST00000530495 ALG13Q9NP73 1137 aaKnown RBP17.09■□□□□ 0.33
CAPN1-219ENST00000530495 KCNH7Q9NS40 1196 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 SLC9A2Q9UBY0 812 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 SLC12A7Q9Y666 1083 aa17.09■□□□□ 0.33
CAPN1-219ENST00000530495 MBTPS2O43462 519 aa17.08■□□□□ 0.32
CAPN1-219ENST00000530495 GTF2F1P35269 517 aaKnown RBP eCLIP17.08■□□□□ 0.32
CAPN1-219ENST00000530495 IRS1P35568 1242 aa17.08■□□□□ 0.32
CAPN1-219ENST00000530495 TMTC3Q6ZXV5 915 aa17.08■□□□□ 0.32
CAPN1-219ENST00000530495 PLPPR4Q7Z2D5 763 aa17.08■□□□□ 0.32
CAPN1-219ENST00000530495 NPAS4Q8IUM7 802 aa17.08■□□□□ 0.32
CAPN1-219ENST00000530495 TEX2Q8IWB9 1127 aa17.08■□□□□ 0.32
CAPN1-219ENST00000530495 CELF4Q9BZC1 486 aaKnown RBP17.08■□□□□ 0.32
CAPN1-219ENST00000530495 LSG1Q9H089 658 aaKnown RBP17.08■□□□□ 0.32
CAPN1-219ENST00000530495 FAM49AQ9H0Q0 323 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-219ENST00000530495 PADI3Q9ULW8 664 aa17.08■□□□□ 0.32
CAPN1-219ENST00000530495 TRPV2Q9Y5S1 764 aa17.08■□□□□ 0.32
CAPN1-219ENST00000530495 MRPL42Q9Y6G3 142 aaKnown RBP17.08■□□□□ 0.32
CAPN1-219ENST00000530495 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 NFASCO94856 1347 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 IGSF9BQ9UPX0 1349 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 M0QZ92 97 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 SLC27A2O14975 620 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 STAT5BP51692 787 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 ACTR2P61160 394 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 PLCB4Q15147 1175 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 NECTIN1Q15223 517 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 FAM43BQ6ZT52 329 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-219ENST00000530495 HEATR3Q7Z4Q2 680 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 SGMS1Q86VZ5 419 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 NME8Q8N427 588 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 CYP2W1Q8TAV3 490 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms