RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 ATF7P17544 494 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-206ENST00000530277 TMOD1P28289 359 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 DHX9Q08211 1270 aaKnown RBP13.47□□□□□ -0.25
SCN3B-206ENST00000530277 IFT88Q13099 833 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-206ENST00000530277 WDR44Q5JSH3 913 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 LMBRD2Q68DH5 695 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-206ENST00000530277 OTUD6AQ7L8S5 288 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 ARFGAP2Q8N6H7 521 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 MTA3Q9BTC8 594 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 TEKT3Q9BXF9 490 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 PARVGQ9HBI0 331 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-206ENST00000530277 BCL9O00512 1426 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 SERPING1P05155 500 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 MYBP10242 640 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 IL17AQ16552 155 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 SBK1Q52WX2 424 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 ZNF365Q70YC5 407 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 MAGEF1Q9HAY2 307 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 PICK1Q9NRD5 415 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 SWAP70Q9UH65 585 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 TBK1Q9UHD2 729 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 SRGNP10124 158 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 ZKSCAN8Q15776 578 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-206ENST00000530277 UBL4BQ8N7F7 174 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 OR2W6PQ8NHA6 318 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 LRRC45Q96CN5 670 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 THOC1Q96FV9 657 aaKnown RBP13.47□□□□□ -0.25
SCN3B-206ENST00000530277 RAVER2Q9HCJ3 691 aaKnown RBP13.47□□□□□ -0.25
SCN3B-206ENST00000530277 MED4Q9NPJ6 270 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 STIM2Q9P246 746 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-206ENST00000530277 TNS2Q63HR2 1409 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 NDUFB10O96000 172 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.25
SCN3B-206ENST00000530277 KCNK18Q7Z418 384 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 GUF1Q8N442 669 aaKnown RBP13.46□□□□□ -0.25
SCN3B-206ENST00000530277 SAAL1Q96ER3 474 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 ZMYND12Q9H0C1 365 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.25
SCN3B-206ENST00000530277 SNX24Q9Y343 169 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 NRXN3Q9Y4C0 1643 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 PSMC2P35998 433 aaKnown RBP13.46□□□□□ -0.25
SCN3B-206ENST00000530277 USP14P54578 494 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 HP1BP3Q5SSJ5 553 aaPredicted RBP13.46□□□□□ -0.25
SCN3B-206ENST00000530277 DCUN1D2Q6PH85 259 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 USP37Q86T82 979 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 GLG1Q92896 1179 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 SH2D4AQ9H788 454 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 TMOD4Q9NZQ9 345 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 DMGDHQ9UI17 866 aaKnown RBP13.46□□□□□ -0.25
SCN3B-206ENST00000530277 DNAJC12Q9UKB3 198 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 MRPL11Q9Y3B7 192 aaKnown RBP13.46□□□□□ -0.25
SCN3B-206ENST00000530277 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
SCN3B-206ENST00000530277 ZSCAN5CA6NGD5 496 aaPredicted RBP13.46□□□□□ -0.26
SCN3B-206ENST00000530277 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.26
SCN3B-206ENST00000530277 PRPHP41219 470 aa13.46□□□□□ -0.26
SCN3B-206ENST00000530277 GIMAP7Q8NHV1 300 aa13.46□□□□□ -0.26
SCN3B-206ENST00000530277 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.26
SCN3B-206ENST00000530277 PACSIN1Q9BY11 444 aa13.46□□□□□ -0.26
SCN3B-206ENST00000530277 SEMA6BQ9H3T3 888 aa13.46□□□□□ -0.26
SCN3B-206ENST00000530277 RBM12Q9NTZ6 932 aaKnown RBP13.46□□□□□ -0.26
SCN3B-206ENST00000530277 AMACRQ9UHK6 382 aa13.46□□□□□ -0.26
SCN3B-206ENST00000530277 H3BQF6 201 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 KLRC1P26715 233 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 ECE1P42892 770 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 SARSP49591 514 aaKnown RBP13.45□□□□□ -0.26
SCN3B-206ENST00000530277 MTM1Q13496 603 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 IFT74Q96LB3 600 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 REEP2Q9BRK0 252 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 DHX36Q9H2U1 1008 aaKnown RBP13.45□□□□□ -0.26
SCN3B-206ENST00000530277 NOVA2Q9UNW9 492 aaKnown RBP13.45□□□□□ -0.26
SCN3B-206ENST00000530277 SPATA31A5Q5VU36 1347 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 SPATA31A7Q8IWB4 1347 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 MYL1P05976 194 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 H2AFXP16104 143 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-206ENST00000530277 GRB10Q13322 594 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 PASD1Q8IV76 773 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 PALM3A6NDB9 673 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-206ENST00000530277 SLC16A4O15374 487 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 IGBP1P78318 339 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 CDKAL1Q5VV42 579 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 CYP4F22Q6NT55 531 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 TTI2Q6NXR4 508 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 C16orf86Q6ZW13 317 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 METTL13Q8N6R0 699 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 HDAC7Q8WUI4 952 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 ZNF653Q96CK0 615 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 CEP170P1Q96L14 293 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 METTL14Q9HCE5 456 aaKnown RBP13.45□□□□□ -0.26
SCN3B-206ENST00000530277 SEPT9Q9UHD8 586 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-206ENST00000530277 FAM184BQ9ULE4 1060 aa13.45□□□□□ -0.26
SCN3B-206ENST00000530277 FOSP01100 380 aaPredicted RBP13.44□□□□□ -0.26
SCN3B-206ENST00000530277 PSMC6P62333 389 aa13.44□□□□□ -0.26
SCN3B-206ENST00000530277 MTERF2Q49AM1 385 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms